RNA–Protein interactions for RNA: ENST00000577250.1

RIOK3-202, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-202ENST00000577250 PHF24Q9UPV7 400 aa11.43□□□□□ -0.58
RIOK3-202ENST00000577250 A0A1W2PQ45 241 aaPredicted RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 A0A1W2PQY0 241 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 TRIM43BA6NCK2 446 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 DCDC2CA8MYV0 355 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 PATL2C9JE40 543 aaKnown RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 ERC2O15083 957 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 CLTBP09497 229 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 ZNF865P0CJ78 1059 aaPredicted RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 TSPY3P0CV98 308 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 TSPY8P0CW00 308 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 RAG1P15918 1043 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 PDE4BQ07343 736 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 IKQ13123 557 aaPredicted RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 SNX17Q15036 470 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 C9orf50Q5SZB4 431 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 C1orf53Q5VUE5 145 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 REPS2Q8NFH8 660 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 NUP133Q8WUM0 1156 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 TRIM43Q96BQ3 446 aaPredicted RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 LENG1Q96BZ8 264 aaPredicted RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 TMEM39AQ9NV64 488 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
RIOK3-202ENST00000577250 FEM1BQ9UK73 627 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 RIPK3Q9Y572 518 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 ZNF236Q9UL36 1845 aa11.42□□□□□ -0.58
RIOK3-202ENST00000577250 M0R2C6 588 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 TTLL1O95922 423 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 LRRC47Q8N1G4 583 aaKnown RBP11.41□□□□□ -0.58
RIOK3-202ENST00000577250 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 GUCD1Q96NT3 240 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
RIOK3-202ENST00000577250 FSD1Q9BTV5 496 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 NAPBQ9H115 298 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 SPC25Q9HBM1 224 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 EPB41L4AQ9HCS5 686 aaPredicted RBP11.41□□□□□ -0.58
RIOK3-202ENST00000577250 STARD7Q9NQZ5 370 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 MTMR4Q9NYA4 1195 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 FBXO40Q9UH90 709 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
RIOK3-202ENST00000577250 SYNGAP1Q96PV0 1343 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 COL6A3P12111 3177 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 ATP2A1O14983 1001 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 SNAI1O95863 264 aaPredicted RBP11.4□□□□□ -0.58
RIOK3-202ENST00000577250 BMP3P12645 472 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 ACLYP53396 1101 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 ACVR2BQ13705 512 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 KCNA10Q16322 511 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 SLFN13Q68D06 897 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 NOL8Q76FK4 1167 aaKnown RBP11.4□□□□□ -0.58
RIOK3-202ENST00000577250 CHST13Q8NET6 341 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 CHMP4CQ96CF2 233 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 RNPC3Q96LT9 517 aaKnown RBP11.4□□□□□ -0.58
RIOK3-202ENST00000577250 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 A0A0G2JMZ2 1700 aa11.4□□□□□ -0.58
RIOK3-202ENST00000577250 ROBO3Q96MS0 1386 aa11.4□□□□□ -0.59
RIOK3-202ENST00000577250 SYNRGQ9UMZ2 1314 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 BAZ2AQ9UIF9 1905 aaKnown RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 IGKV6D-41A0A0C4DH26 115 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 TMEM232C9JQI7 657 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 ADAMTS4O75173 837 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 SMAD3P84022 425 aaKnown RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 TFAP4Q01664 338 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 FPGSQ05932 587 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 MAMDC4Q6UXC1 1216 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 PCSK9Q8NBP7 692 aaKnown RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 CHURC1Q8WUH1 139 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 MKL1Q969V6 931 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 SEC62Q99442 399 aaKnown RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 CDX2Q99626 313 aaPredicted RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 SEMA6BQ9H3T3 888 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 ABHD16BQ9H3Z7 469 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 SLC38A10Q9HBR0 1119 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.39□□□□□ -0.59
RIOK3-202ENST00000577250 RLFQ13129 1914 aa11.39□□□□□ -0.59
RIOK3-202ENST00000577250 TTC41PQ6P2S7 1318 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 FRMPD3Q5JV73 1810 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 DNAJC25-GNG10A0A024R161 153 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 KIAA0355O15063 1070 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 FDX1P10109 184 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 ITGB8P26012 769 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 SLC1A4P43007 532 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 STAT2P52630 851 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 OAZ1P54368 228 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 PPARAQ07869 468 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 CCDC144BQ3MJ40 725 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 GNASQ5JWF2 1037 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 PPP4R3BQ5MIZ7 849 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 ARMCX2Q7L311 632 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
RIOK3-202ENST00000577250 NEDD1Q8NHV4 660 aa11.38□□□□□ -0.59
RIOK3-202ENST00000577250 TOX2Q96NM4 488 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms