RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 KIAA1328Q86T90 577 aa16.69■□□□□ 0.26
PRPF8-216ENST00000577001 GLIS3Q8NEA6 775 aa16.69■□□□□ 0.26
PRPF8-216ENST00000577001 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
PRPF8-216ENST00000577001 TRIM66O15016 1216 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 TRIM21P19474 475 aaKnown RBP16.68■□□□□ 0.26
PRPF8-216ENST00000577001 ASIC1P78348 528 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 SF3A3Q12874 501 aaKnown RBP eCLIP16.68■□□□□ 0.265e-9■□□□□ 11.1
PRPF8-216ENST00000577001 SYCP1Q15431 976 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 RNF26Q9BY78 433 aaPredicted RBP16.68■□□□□ 0.26
PRPF8-216ENST00000577001 FAN1Q9Y2M0 1017 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 COL4A1P02462 1669 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 GABPB1Q06547 395 aaPredicted RBP16.68■□□□□ 0.26
PRPF8-216ENST00000577001 FUT2Q10981 343 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 ALX1Q15699 326 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 C10orf67Q8IYJ2 551 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 COA7Q96BR5 231 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 NSUN4Q96CB9 384 aaKnown RBP16.68■□□□□ 0.26
PRPF8-216ENST00000577001 CRACR2AQ9BSW2 395 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 JADE2Q9NQC1 790 aa16.68■□□□□ 0.26
PRPF8-216ENST00000577001 CTAGE9A4FU28 777 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
PRPF8-216ENST00000577001 MTIF2P46199 727 aaKnown RBP16.67■□□□□ 0.26
PRPF8-216ENST00000577001 SNAP25P60880 206 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
PRPF8-216ENST00000577001 PDE4CQ08493 712 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 CCDC122Q5T0U0 273 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 GPCPD1Q9NPB8 672 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 BAZ2AQ9UIF9 1905 aaKnown RBP16.67■□□□□ 0.26
PRPF8-216ENST00000577001 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 SLC7A5Q01650 507 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 SLC30A10Q6XR72 485 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 TANGO6Q9C0B7 1094 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 LCMT1Q9UIC8 334 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 CNTNAP5Q8WYK1 1306 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 ATP1A1P05023 1023 aaKnown RBP16.67■□□□□ 0.26
PRPF8-216ENST00000577001 GNAT2P19087 354 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 DHX37Q8IY37 1157 aaKnown RBP16.67■□□□□ 0.26
PRPF8-216ENST00000577001 LRRC47Q8N1G4 583 aaKnown RBP16.67■□□□□ 0.26
PRPF8-216ENST00000577001 TMTC2Q8N394 836 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 LACRTQ9GZZ8 138 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 IL17RBQ9NRM6 502 aa16.67■□□□□ 0.26
PRPF8-216ENST00000577001 RCCD1A6NED2 376 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 CCP110O43303 1012 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 ANKZF1Q9H8Y5 726 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 ABHD10Q9NUJ1 306 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 ZRANB2O95218 330 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRPF8-216ENST00000577001 NAPAP54920 295 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 EZH2Q15910 746 aaKnown RBP16.66■□□□□ 0.26
PRPF8-216ENST00000577001 BLIDQ8IZY5 108 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
PRPF8-216ENST00000577001 TJP1Q07157 1748 aa16.66■□□□□ 0.26
PRPF8-216ENST00000577001 PRPF3O43395 683 aaKnown RBP16.65■□□□□ 0.26
PRPF8-216ENST00000577001 PDE4DQ08499 809 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 DTHD1Q6ZMT9 781 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 ZNF444Q8N0Y2 327 aaPredicted RBP16.65■□□□□ 0.26
PRPF8-216ENST00000577001 MMRN2Q9H8L6 949 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 SLIT2O94813 1529 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 COL1A1P02452 1464 aaPredicted RBP16.65■□□□□ 0.26
PRPF8-216ENST00000577001 CYTH3O43739 400 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 SLC16A2P36021 539 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 STK4Q13043 487 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 TCP11X2Q5H9J9 407 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 FUT8Q9BYC5 575 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 NLRC4Q9NPP4 1024 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 NCK2O43639 380 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 MARCH6O60337 910 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 C2orf54Q08AI8 447 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 CSGALNACT2Q8N6G5 542 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
PRPF8-216ENST00000577001 ERVV-1B6SEH8 477 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 BUB1O43683 1085 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 PLCG1P19174 1290 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 TXLNAP40222 546 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
PRPF8-216ENST00000577001 NLRP3Q96P20 1036 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 MLXIPQ9HAP2 919 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 ADAM21Q9UKJ8 722 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 CTAGE15A4D2H0 777 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 POTEMA6NI47 508 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 RCSD1Q6JBY9 416 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 KANK3Q6NY19 840 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 NELFCDQ8IXH7 590 aa16.64■□□□□ 0.25
PRPF8-216ENST00000577001 EPN1Q9Y6I3 576 aaPredicted RBP16.64■□□□□ 0.25
PRPF8-216ENST00000577001 RTL9Q8NET4 1388 aa16.63■□□□□ 0.25
PRPF8-216ENST00000577001 WDR19Q8NEZ3 1342 aa16.63■□□□□ 0.25
PRPF8-216ENST00000577001 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
PRPF8-216ENST00000577001 BCL9O00512 1426 aa16.63■□□□□ 0.25
PRPF8-216ENST00000577001 SRGAP1Q7Z6B7 1085 aa16.63■□□□□ 0.25
PRPF8-216ENST00000577001 LUC7L2Q9Y383 392 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms