RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 PASKQ96RG2 1323 aa19.06■□□□□ 0.64
ERCC4-208ENST00000576348 IRF6O14896 467 aa19.06■□□□□ 0.64
ERCC4-208ENST00000576348 ADGRF4Q8IZF3 695 aa19.06■□□□□ 0.64
ERCC4-208ENST00000576348 WNK4Q96J92 1243 aa19.06■□□□□ 0.64
ERCC4-208ENST00000576348 PIGSQ96S52 555 aa19.06■□□□□ 0.64
ERCC4-208ENST00000576348 WDR33Q9C0J8 1336 aaKnown RBP19.05■□□□□ 0.64
ERCC4-208ENST00000576348 STX6O43752 255 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 FLOT1O75955 427 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 SCG2P13521 617 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 FDPSP14324 419 aaKnown RBP19.05■□□□□ 0.64
ERCC4-208ENST00000576348 SYT1P21579 422 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 DGKZQ13574 1117 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 SH3D19Q5HYK7 790 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 BTNL9Q6UXG8 535 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 FASTKD5Q7L8L6 764 aaKnown RBP19.05■□□□□ 0.64
ERCC4-208ENST00000576348 HEATR3Q7Z4Q2 680 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 SLF1Q9BQI6 1058 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 RIOX1Q9H6W3 641 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 KCNH4Q9UQ05 1017 aa19.05■□□□□ 0.64
ERCC4-208ENST00000576348 A0A0G2JLL6 359 aaPredicted RBP19.04■□□□□ 0.64
ERCC4-208ENST00000576348 TMEM88BA6NKF7 163 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L15C9J2P7 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L13C9JLJ4 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L11C9JVI0 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L18D6R9N7 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L22D6RA61 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L17D6RBQ6 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L19D6RCP7 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L20D6RJB6 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 CYTH3O43739 400 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 PLA2G6O60733 806 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 ZNF157P51786 506 aaPredicted RBP19.04■□□□□ 0.64
ERCC4-208ENST00000576348 USP17L24Q0WX57 530 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 MKRN3Q13064 507 aaKnown RBP19.04■□□□□ 0.64
ERCC4-208ENST00000576348 SAFBQ15424 915 aaKnown RBP eCLIP19.04■□□□□ 0.64
ERCC4-208ENST00000576348 PFKFB3Q16875 520 aaPredicted RBP19.04■□□□□ 0.64
ERCC4-208ENST00000576348 PRRT2Q7Z6L0 340 aaPredicted RBP19.04■□□□□ 0.64
ERCC4-208ENST00000576348 JMJD4Q9H9V9 463 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 PRR12Q9ULL5 1215 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 ATAD5Q96QE3 1844 aa19.04■□□□□ 0.64
ERCC4-208ENST00000576348 PNMA6FA0A0J9YX94 578 aa19.03■□□□□ 0.64
ERCC4-208ENST00000576348 GTF2A2P52657 109 aa19.03■□□□□ 0.64
ERCC4-208ENST00000576348 GUCY1B3Q02153 619 aa19.03■□□□□ 0.64
ERCC4-208ENST00000576348 TRAF1Q13077 416 aa19.03■□□□□ 0.64
ERCC4-208ENST00000576348 PABPC4Q13310 644 aaKnown RBP eCLIP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 CDC37Q16543 378 aaPredicted RBP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 SLC35G1Q2M3R5 365 aa19.03■□□□□ 0.64
ERCC4-208ENST00000576348 FOXD4L5Q5VV16 416 aaPredicted RBP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 MCTP1Q6DN14 999 aa19.03■□□□□ 0.64
ERCC4-208ENST00000576348 PRPF38AQ8NAV1 312 aaKnown RBP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 PROCA1Q8NCQ7 364 aaPredicted RBP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 CCDC12Q8WUD4 166 aaPredicted RBP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 FOXD4L4Q8WXT5 416 aaPredicted RBP19.03■□□□□ 0.64
ERCC4-208ENST00000576348 AIFM3Q96NN9 605 aa19.03■□□□□ 0.64
ERCC4-208ENST00000576348 hCG_1984214I3L0E3 225 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 ZBTB5O15062 677 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 ZBED4O75132 1171 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 ZBTB48P10074 688 aaPredicted RBP19.02■□□□□ 0.64
ERCC4-208ENST00000576348 CETPP11597 493 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 DDIT3P35638 169 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 NAPAP54920 295 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 IRX3P78415 501 aaPredicted RBP19.02■□□□□ 0.64
ERCC4-208ENST00000576348 PKN1Q16512 942 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 SPRYD7Q5W111 196 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 RGMBQ6NW40 437 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 PAXIP1Q6ZW49 1069 aaPredicted RBP19.02■□□□□ 0.64
ERCC4-208ENST00000576348 ZNF713Q8N859 430 aaPredicted RBP19.02■□□□□ 0.64
ERCC4-208ENST00000576348 CCDC148Q8NFR7 591 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 GPKOWQ92917 476 aaPredicted RBP eCLIP19.02■□□□□ 0.64
ERCC4-208ENST00000576348 BRMS1Q9HCU9 246 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 FBXO28Q9NVF7 368 aa19.02■□□□□ 0.64
ERCC4-208ENST00000576348 MYH4Q9Y623 1939 aa19.02■□□□□ 0.63
ERCC4-208ENST00000576348 GJA5P36382 358 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 NLRP5P59047 1200 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 SNAP25P60880 206 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 QRICH1Q2TAL8 776 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 KRT40Q6A162 431 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 OTUD7BQ6GQQ9 843 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 SAPCD2Q86UD0 394 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 VPS54Q9P1Q0 977 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 PPP1R9AQ9ULJ8 1098 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 TLL2Q9Y6L7 1015 aa19.01■□□□□ 0.63
ERCC4-208ENST00000576348 CCL15-CCL14A0A0B4J2E2 113 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 ZSCAN22P10073 491 aaPredicted RBP19■□□□□ 0.63
ERCC4-208ENST00000576348 FDX1P10109 184 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 COG2Q14746 738 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 CCL15Q16663 113 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 WWC2Q6AWC2 1192 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 CCDC174Q6PII3 467 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 CATSPERGQ6ZRH7 1159 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 FBXO11Q86XK2 927 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 FBXO18Q8NFZ0 1043 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 AMNQ9BXJ7 453 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 SH3GLB2Q9NR46 395 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 AGTPBP1Q9UPW5 1226 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 MTMR6Q9Y217 621 aa19■□□□□ 0.63
ERCC4-208ENST00000576348 OTOFQ9HC10 1997 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 OSBPP22059 807 aa18.99■□□□□ 0.63
ERCC4-208ENST00000576348 CALML3P27482 149 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms