RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 TMTC2Q8N394 836 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 TMEM87BQ96K49 555 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 MOV10L1Q9BXT6 1211 aaKnown RBP17.8■□□□□ 0.44
LITAF-217ENST00000575426 PORCNQ9H237 461 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
LITAF-217ENST00000575426 HMGB1P09429 215 aaKnown RBP17.79■□□□□ 0.44
LITAF-217ENST00000575426 COPB2P35606 906 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 SLC4A3P48751 1232 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 PRKCZQ05513 592 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 ZNF543Q08ER8 600 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 GPR142Q7Z601 462 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 NCAPG2Q86XI2 1143 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 SHCBP1Q8NEM2 672 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 NUDT12Q9BQG2 462 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 USP26Q9BXU7 913 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 MROH8Q9H579 483 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 GABRQQ9UN88 632 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 PTCH2Q9Y6C5 1203 aa17.79■□□□□ 0.44
LITAF-217ENST00000575426 PARP1P09874 1014 aaKnown RBP17.78■□□□□ 0.44
LITAF-217ENST00000575426 FLT3LGP49771 235 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 ANTXR2P58335 489 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 NFXL1Q6ZNB6 911 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 RASGRP2Q7LDG7 609 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 CATIPQ7Z7H3 387 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 NBPF11Q86T75 865 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 IGDCC4Q8TDY8 1250 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 ABHD8Q96I13 439 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 SLC38A10Q9HBR0 1119 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 PRR12Q9ULL5 1215 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 HPS5Q9UPZ3 1129 aa17.78■□□□□ 0.44
LITAF-217ENST00000575426 CCDC69A6NI79 296 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 STRNO43815 780 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 SNHG28P0DPA3 235 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 ERCC3P19447 782 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 PSMA5P28066 241 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 SLC16A2P36021 539 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 OAZ1P54368 228 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 SLC9C1Q4G0N8 1177 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 SYDE2Q5VT97 1194 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 SNRNP48Q6IEG0 339 aaKnown RBP17.77■□□□□ 0.44
LITAF-217ENST00000575426 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 DHX32Q7L7V1 743 aaKnown RBP17.77■□□□□ 0.44
LITAF-217ENST00000575426 RIOX2Q8IUF8 465 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 REPS2Q8NFH8 660 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 SOCS4Q8WXH5 440 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 KCNB2Q92953 911 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 TEX13BQ9BXU2 312 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 RAVER2Q9HCJ3 691 aaKnown RBP17.77■□□□□ 0.44
LITAF-217ENST00000575426 SNX14Q9Y5W7 946 aa17.77■□□□□ 0.44
LITAF-217ENST00000575426 SLC15A5A6NIM6 579 aa17.76■□□□□ 0.43
LITAF-217ENST00000575426 GOLGA8HP0CJ92 632 aa17.76■□□□□ 0.43
LITAF-217ENST00000575426 PTPREP23469 700 aa17.76■□□□□ 0.43
LITAF-217ENST00000575426 FGD1P98174 961 aa17.76■□□□□ 0.43
LITAF-217ENST00000575426 IRF5Q13568 498 aa17.76■□□□□ 0.43
LITAF-217ENST00000575426 ADCK5Q3MIX3 580 aa17.76■□□□□ 0.43
LITAF-217ENST00000575426 JAKMIP1Q96N16 626 aaKnown RBP17.76■□□□□ 0.43
LITAF-217ENST00000575426 BIN2Q9UBW5 565 aaPredicted RBP17.76■□□□□ 0.43
LITAF-217ENST00000575426 ZNF214Q9UL59 606 aaPredicted RBP17.76■□□□□ 0.43
LITAF-217ENST00000575426 WDR19Q8NEZ3 1342 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 ATP2A1O14983 1001 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 ADCY3O60266 1144 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 CYP2B6P20813 491 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 GRK4P32298 578 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 RGS2P41220 211 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 CCDC174Q6PII3 467 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 BLOC1S2Q6QNY1 142 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 SYNE3Q6ZMZ3 975 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 SLAIN1Q8ND83 568 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 LY9Q9HBG7 655 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 GJD2Q9UKL4 321 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 PLXNA1Q9UIW2 1896 aa17.75■□□□□ 0.43
LITAF-217ENST00000575426 SMCHD1A6NHR9 2005 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
LITAF-217ENST00000575426 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
LITAF-217ENST00000575426 FCER1AP12319 257 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 LIFRP42702 1097 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 MAP2K5Q13163 448 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 DPP9Q86TI2 863 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 NUP133Q8WUM0 1156 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 UBA5Q9GZZ9 404 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 SENP2Q9HC62 589 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 SLC5A4Q9NY91 659 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 FBXO40Q9UH90 709 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 PNMA2Q9UL42 364 aa17.74■□□□□ 0.43
LITAF-217ENST00000575426 CCDC85CA6NKD9 419 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 CALM1P0DP23 149 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 CALM2P0DP24 149 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 CALM3P0DP25 149 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 SNAP25P60880 206 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 EXOSC10Q01780 885 aaKnown RBP17.73■□□□□ 0.43
LITAF-217ENST00000575426 KCTD2Q14681 263 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 TKFCQ3LXA3 575 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 MORN1Q5T089 497 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 TRMT44Q8IYL2 757 aaKnown RBP17.73■□□□□ 0.43
LITAF-217ENST00000575426 ZNF654Q8IZM8 581 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms