RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 GRB10Q13322 594 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 TCIRG1Q13488 830 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 AUHQ13825 339 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 SETDB1Q15047 1291 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 SF1Q15637 639 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 GRIK5Q16478 980 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ELOA3BQ3SY89 546 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 MINDY4Q4G0A6 757 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 NOL9Q5SY16 702 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 IQSEC1Q6DN90 963 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 GTF2IRD2BQ6EKJ0 949 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ZCCHC8Q6NZY4 707 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 MAMDC2Q7Z304 686 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 DDX53Q86TM3 631 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 GTF2IRD2Q86UP8 949 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ANKLE2Q86XL3 938 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 KIF18BQ86Y91 864 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 C7orf61Q8IZ16 206 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ARHGEF39Q8N4T4 335 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 KCT2Q8NC54 265 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 RNF214Q8ND24 703 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ADCY4Q8NFM4 1077 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ELOA3Q8NG57 546 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 FBXO41Q8TF61 875 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 CYB5D2Q8WUJ1 264 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 BTN2A2Q8WVV5 523 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 BRF1Q92994 677 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 ZNF512BQ96KM6 892 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 DPH2Q9BQC3 489 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 MENTQ9BUN1 341 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 WDR18Q9BV38 432 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 CARD10Q9BWT7 1032 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 RHOBTB2Q9BYZ6 727 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 JPH1Q9HDC5 661 aaPredicted RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 OBP2AQ9NY56 170 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 SAMD15Q9P1V8 674 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 USP25Q9UHP3 1055 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 KLF15Q9UIH9 416 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 PNMA2Q9UL42 364 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 LUC7L2Q9Y383 392 aaKnown RBP2.69□□□□□ -1.98
CHD3-217ENST00000574022 PCDHGC5Q9Y5F6 944 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 PCDHA9Q9Y5H5 950 aa2.69□□□□□ -1.98
CHD3-217ENST00000574022 SYNGAP1Q96PV0 1343 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 A0A087WZG4 1122 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 LOC100289279A0A1B0GTE1 492 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 CDC14CA4D256 554 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 NEURL1BA8MQ27 555 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 M0R2C6 588 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 AQP7O14520 342 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 DGAT1O75907 488 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 PRKD3O94806 890 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 FKBP9O95302 570 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 DLGAP3O95886 979 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 CPP00450 1065 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 F2P00734 622 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 CST3P01034 146 aaPredicted RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 FOSP01100 380 aaPredicted RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 SNRPB2P08579 225 aaKnown RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 MYBL2P10244 700 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 ITGA4P13612 1032 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 TRIM27P14373 513 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 NAT1P18440 290 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 MX2P20592 715 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 AFF1P51825 1210 aaKnown RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 GFRA1P56159 465 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 GUCY1A3Q02108 690 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 MAP4K2Q12851 820 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 PICALMQ13492 652 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 MORC3Q14149 939 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 SLBPQ14493 270 aaKnown RBP eCLIP2.68□□□□□ -1.98
CHD3-217ENST00000574022 PPP2R5DQ14738 602 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 NTRK3Q16288 839 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 NKG7Q16617 165 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 ABCB5Q2M3G0 1257 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 SKOR2Q2VWA4 1001 aaPredicted RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 PKDCCQ504Y2 493 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 EXOSC6Q5RKV6 272 aaKnown RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 ZFYVE27Q5T4F4 411 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 C10orf62Q5T681 223 aaPredicted RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 NBPF12Q5TAG4 269 aaPredicted RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 PRAMEF13Q5VWM6 474 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 USP53Q70EK8 1073 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 FKBP9P1Q75LS8 142 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 SV2AQ7L0J3 742 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 WFDC8Q8IUA0 241 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 TPH2Q8IWU9 490 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 NXPE1Q8N323 547 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 VWA5B2Q8N398 1253 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 TMEM145Q8NBT3 493 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 PNISRQ8TF01 805 aaKnown RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 FUBP3Q96I24 572 aaKnown RBP eCLIP2.68□□□□□ -1.98
CHD3-217ENST00000574022 MDFIQ99750 246 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 ORAI3Q9BRQ5 295 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 MAF1Q9H063 256 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 GP6Q9HCN6 339 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 SSU72Q9NP77 194 aaKnown RBP2.68□□□□□ -1.98
CHD3-217ENST00000574022 ATP13A2Q9NQ11 1180 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 CRTAC1Q9NQ79 661 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 PRDM11Q9NQV5 511 aa2.68□□□□□ -1.98
CHD3-217ENST00000574022 DISC1Q9NRI5 854 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms