RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 BMP3P12645 472 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 XRCC5P13010 732 aaKnown RBP15.88■□□□□ 0.13
RPAIN-213ENST00000573577 CYP2B6P20813 491 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 HSPA4P34932 840 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 RGS2P41220 211 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 MLLT1Q03111 559 aaPredicted RBP15.88■□□□□ 0.13
RPAIN-213ENST00000573577 TMEM132BQ14DG7 1078 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 MTFR1Q15390 333 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 PRPF38AQ8NAV1 312 aaKnown RBP15.88■□□□□ 0.13
RPAIN-213ENST00000573577 ZKSCAN3Q9BRR0 538 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 FEM1BQ9UK73 627 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 IVNS1ABPQ9Y6Y0 642 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 PLXNB2O15031 1838 aa15.88■□□□□ 0.13
RPAIN-213ENST00000573577 DOCK3Q8IZD9 2030 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 SLC15A5A6NIM6 579 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 HMGCRP04035 888 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 CCL5P13501 91 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 ERCC3P19447 782 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 PTPREP23469 700 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 MCM5P33992 734 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 SLC1A4P43007 532 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 MAP2K5Q13163 448 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 GRB14Q14449 540 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 MB21D2Q8IYB1 491 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-213ENST00000573577 REPS2Q8NFH8 660 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 NKX2-3Q8TAU0 364 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 ANKS1AQ92625 1134 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 APBA2Q99767 749 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 TMEM47Q9BQJ4 181 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 MTA3Q9BTC8 594 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 USP26Q9BXU7 913 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 MROH8Q9H579 483 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 ZNF214Q9UL59 606 aaPredicted RBP15.87■□□□□ 0.13
RPAIN-213ENST00000573577 ISY1Q9ULR0 285 aaKnown RBP15.87■□□□□ 0.13
RPAIN-213ENST00000573577 TAF6LQ9Y6J9 622 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 TNKSO95271 1327 aa15.87■□□□□ 0.13
RPAIN-213ENST00000573577 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 IFIT3O14879 490 aaKnown RBP15.86■□□□□ 0.13
RPAIN-213ENST00000573577 SLC25A27O95847 323 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 HMGB1P09429 215 aaKnown RBP15.86■□□□□ 0.13
RPAIN-213ENST00000573577 IFIT1BQ5T764 474 aaKnown RBP15.86■□□□□ 0.13
RPAIN-213ENST00000573577 CYB5R4Q7L1T6 521 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 NCAPG2Q86XI2 1143 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 TRMT44Q8IYL2 757 aaKnown RBP15.86■□□□□ 0.13
RPAIN-213ENST00000573577 ENAHQ8N8S7 591 aaPredicted RBP15.86■□□□□ 0.13
RPAIN-213ENST00000573577 TRIB2Q92519 343 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 KCNB2Q92953 911 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 KIFC2Q96AC6 838 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 NEK1Q96PY6 1258 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 RNF208Q9H0X6 261 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 UNC93B1Q9H1C4 597 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 KAT14Q9H8E8 782 aa15.86■□□□□ 0.13
RPAIN-213ENST00000573577 TMEM232C9JQI7 657 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 STRNO43815 780 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 ZBED4O75132 1171 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 EN2P19622 333 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-213ENST00000573577 STAT3P40763 770 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 STAT2P52630 851 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 RCSD1Q6JBY9 416 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 RIOX2Q8IUF8 465 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 DCAF4Q8WV16 495 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 CHMP4CQ96CF2 233 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 TEX13BQ9BXU2 312 aa15.85■□□□□ 0.13
RPAIN-213ENST00000573577 ZNF236Q9UL36 1845 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 ATP2A1O14983 1001 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 PRC1O43663 620 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 GJB1P08034 283 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 HOXC6P09630 235 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 PSMA5P28066 241 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 ADORA2AP29274 412 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 COPB2P35606 906 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-213ENST00000573577 WTAPQ15007 396 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 CCL14Q16627 93 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 TMEM67Q5HYA8 995 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 KCTD1Q719H9 257 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 RASGRP2Q7LDG7 609 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 FAM160B2Q86V87 743 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 RASEFQ8IZ41 740 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 ABRAQ8N0Z2 381 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 TMTC2Q8N394 836 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 PNMA1Q8ND90 353 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 CHURC1Q8WUH1 139 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 TMEM87BQ96K49 555 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 SLC38A10Q9HBR0 1119 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
RPAIN-213ENST00000573577 CTDP1Q9Y5B0 961 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-213ENST00000573577 COL11A1P12107 1806 aaPredicted RBP15.84■□□□□ 0.13
RPAIN-213ENST00000573577 KIAA0100Q14667 2235 aaKnown RBP15.83■□□□□ 0.13
RPAIN-213ENST00000573577 PLA2G6O60733 806 aa15.83■□□□□ 0.12
RPAIN-213ENST00000573577 FDX1P10109 184 aa15.83■□□□□ 0.12
RPAIN-213ENST00000573577 FCER1AP12319 257 aa15.83■□□□□ 0.12
RPAIN-213ENST00000573577 TRIM32Q13049 653 aa15.83■□□□□ 0.12
RPAIN-213ENST00000573577 SEC23AQ15436 765 aa15.83■□□□□ 0.12
RPAIN-213ENST00000573577 CCDC96Q2M329 555 aa15.83■□□□□ 0.12
RPAIN-213ENST00000573577 SNRNP48Q6IEG0 339 aaKnown RBP15.83■□□□□ 0.12
RPAIN-213ENST00000573577 PAK6Q9NQU5 681 aaPredicted RBP15.83■□□□□ 0.12
RPAIN-213ENST00000573577 SNX14Q9Y5W7 946 aa15.83■□□□□ 0.12
RPAIN-213ENST00000573577 WDR19Q8NEZ3 1342 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms