RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 NECAB2Q7Z6G3 386 aa20.55■□□□□ 0.88
SMG6-212ENST00000573153 GMCL1Q96IK5 515 aa20.55■□□□□ 0.88
SMG6-212ENST00000573153 FGD4Q96M96 766 aa20.55■□□□□ 0.88
SMG6-212ENST00000573153 CWC22Q9HCG8 908 aaKnown RBP20.55■□□□□ 0.88
SMG6-212ENST00000573153 ZNF536O15090 1300 aa20.54■□□□□ 0.88
SMG6-212ENST00000573153 DNAJC25-GNG10A0A024R161 153 aa20.54■□□□□ 0.88
SMG6-212ENST00000573153 RAD21O60216 631 aa20.54■□□□□ 0.88
SMG6-212ENST00000573153 SLFN13Q68D06 897 aa20.54■□□□□ 0.88
SMG6-212ENST00000573153 PRPF38AQ8NAV1 312 aaKnown RBP20.54■□□□□ 0.88
SMG6-212ENST00000573153 DPF3Q92784 378 aa20.54■□□□□ 0.88
SMG6-212ENST00000573153 RILPL2Q969X0 211 aa20.54■□□□□ 0.88
SMG6-212ENST00000573153 TEX13BQ9BXU2 312 aa20.54■□□□□ 0.88
SMG6-212ENST00000573153 DDX20Q9UHI6 824 aaKnown RBP20.54■□□□□ 0.88
SMG6-212ENST00000573153 PGK2P07205 417 aa20.53■□□□□ 0.88
SMG6-212ENST00000573153 SLC3A2P08195 630 aaKnown RBP20.53■□□□□ 0.88
SMG6-212ENST00000573153 FCER1AP12319 257 aa20.53■□□□□ 0.88
SMG6-212ENST00000573153 RCSD1Q6JBY9 416 aa20.53■□□□□ 0.88
SMG6-212ENST00000573153 DPP9Q86TI2 863 aa20.53■□□□□ 0.88
SMG6-212ENST00000573153 C11orf49Q9H6J7 331 aa20.53■□□□□ 0.88
SMG6-212ENST00000573153 FEM1BQ9UK73 627 aa20.53■□□□□ 0.88
SMG6-212ENST00000573153 BMP3P12645 472 aa20.52■□□□□ 0.88
SMG6-212ENST00000573153 PRAMEF19Q5SWL8 479 aa20.52■□□□□ 0.88
SMG6-212ENST00000573153 SNRNP48Q6IEG0 339 aaKnown RBP20.52■□□□□ 0.88
SMG6-212ENST00000573153 MMP19Q99542 508 aa20.52■□□□□ 0.88
SMG6-212ENST00000573153 TSPY2A6NKD2 308 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 PLA2G6O60733 806 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 HAND2P61296 217 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 STAG1Q8WVM7 1258 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 KIFC2Q96AC6 838 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 RAVER2Q9HCJ3 691 aaKnown RBP20.51■□□□□ 0.87
SMG6-212ENST00000573153 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 PCDH10Q9P2E7 1040 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 DIS3Q9Y2L1 958 aaKnown RBP20.51■□□□□ 0.87
SMG6-212ENST00000573153 NEDD4P46934 1319 aa20.51■□□□□ 0.87
SMG6-212ENST00000573153 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
SMG6-212ENST00000573153 TAL1P17542 331 aaPredicted RBP20.5■□□□□ 0.87
SMG6-212ENST00000573153 COPB2P35606 906 aa20.5■□□□□ 0.87
SMG6-212ENST00000573153 FXR1P51114 621 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMG6-212ENST00000573153 CHRDL2Q6WN34 429 aa20.5■□□□□ 0.87
SMG6-212ENST00000573153 STX8Q9UNK0 236 aa20.5■□□□□ 0.87
SMG6-212ENST00000573153 LCTP09848 1927 aa20.5■□□□□ 0.87
SMG6-212ENST00000573153 SEPT4O43236 478 aa20.49■□□□□ 0.87
SMG6-212ENST00000573153 RANBP6O60518 1105 aaKnown RBP20.49■□□□□ 0.87
SMG6-212ENST00000573153 MCCP23508 829 aa20.49■□□□□ 0.87
SMG6-212ENST00000573153 OAZ1P54368 228 aa20.49■□□□□ 0.87
SMG6-212ENST00000573153 LRRC26Q2I0M4 334 aa20.49■□□□□ 0.87
SMG6-212ENST00000573153 TTC22Q5TAA0 569 aa20.49■□□□□ 0.87
SMG6-212ENST00000573153 CWC27Q6UX04 472 aaKnown RBP20.49■□□□□ 0.87
SMG6-212ENST00000573153 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
SMG6-212ENST00000573153 LRRC37A2A6NM11 1700 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 TRIOBPQ9H2D6 2365 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 MSCO60682 206 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 ZNF865P0CJ78 1059 aaPredicted RBP20.48■□□□□ 0.87
SMG6-212ENST00000573153 STAT2P52630 851 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 MFAP1P55081 439 aaKnown RBP20.48■□□□□ 0.87
SMG6-212ENST00000573153 KCTD2Q14681 263 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 AKNAD1Q5T1N1 836 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 CPXCR1Q8N123 301 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 TMEM47Q9BQJ4 181 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 TINF2Q9BSI4 451 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 DNAH12Q6ZR08 3092 aa20.48■□□□□ 0.87
SMG6-212ENST00000573153 HIP1O00291 1037 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 EVI5O60447 810 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 SLC1A4P43007 532 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 PPP4R3BQ5MIZ7 849 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 CHMP4CQ96CF2 233 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 SMCHD1A6NHR9 2005 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 ASTN1O14525 1302 aa20.47■□□□□ 0.87
SMG6-212ENST00000573153 ZBED4O75132 1171 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 SNAI1O95863 264 aaPredicted RBP20.46■□□□□ 0.87
SMG6-212ENST00000573153 SNHG28P0DPA3 235 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 TTBK2Q6IQ55 1244 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 BTNL9Q6UXG8 535 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 FAM160B2Q86V87 743 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 C7orf61Q8IZ16 206 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 AGBL1Q96MI9 1066 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 GDF15Q99988 308 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 DSCC1Q9BVC3 393 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 KATNBL1Q9H079 304 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 SLC5A4Q9NY91 659 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 NRBP1Q9UHY1 535 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 PRR12Q9ULL5 1215 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 NR2E3Q9Y5X4 410 aa20.46■□□□□ 0.87
SMG6-212ENST00000573153 DNM1LO00429 736 aa20.45■□□□□ 0.86
SMG6-212ENST00000573153 PCP11498 1178 aaKnown RBP20.45■□□□□ 0.86
SMG6-212ENST00000573153 CNGA1P29973 690 aa20.45■□□□□ 0.86
SMG6-212ENST00000573153 SNAP25P60880 206 aa20.45■□□□□ 0.86
SMG6-212ENST00000573153 RRP12Q5JTH9 1297 aaKnown RBP20.45■□□□□ 0.86
SMG6-212ENST00000573153 DIAPH3Q9NSV4 1193 aa20.45■□□□□ 0.86
SMG6-212ENST00000573153 LAMA3Q16787 3333 aa20.45■□□□□ 0.86
SMG6-212ENST00000573153 SZT2Q5T011 3432 aa20.45■□□□□ 0.86
SMG6-212ENST00000573153 ADCY6O43306 1168 aa20.44■□□□□ 0.86
SMG6-212ENST00000573153 FDX1P10109 184 aa20.44■□□□□ 0.86
SMG6-212ENST00000573153 PDHBP11177 359 aa20.44■□□□□ 0.86
SMG6-212ENST00000573153 TOP1P11387 765 aaKnown RBP20.44■□□□□ 0.86
SMG6-212ENST00000573153 ZNF467Q7Z7K2 595 aaPredicted RBP20.44■□□□□ 0.86
SMG6-212ENST00000573153 FAM133AQ8N9E0 248 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms