RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 SNX17Q15036 470 aa23.01■■□□□ 1.27
HCFC1R1-204ENST00000573095 LRRC47Q8N1G4 583 aaKnown RBP23.01■■□□□ 1.27
HCFC1R1-204ENST00000573095 CRBNQ96SW2 442 aa23.01■■□□□ 1.27
HCFC1R1-204ENST00000573095 FOXP2O15409 715 aa23■■□□□ 1.27
HCFC1R1-204ENST00000573095 MDM2Q00987 491 aaPredicted RBP23■■□□□ 1.27
HCFC1R1-204ENST00000573095 LRRC41Q15345 812 aa23■■□□□ 1.27
HCFC1R1-204ENST00000573095 MSL3Q8N5Y2 521 aaKnown RBP23■■□□□ 1.27
HCFC1R1-204ENST00000573095 SLC38A10Q9HBR0 1119 aa23■■□□□ 1.27
HCFC1R1-204ENST00000573095 ZBTB47Q9UFB7 747 aaPredicted RBP23■■□□□ 1.27
HCFC1R1-204ENST00000573095 FEM1BQ9UK73 627 aa23■■□□□ 1.27
HCFC1R1-204ENST00000573095 RIPK3Q9Y572 518 aa23■■□□□ 1.27
HCFC1R1-204ENST00000573095 DNAH12Q6ZR08 3092 aa22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 DNAJC25-GNG10A0A024R161 153 aa22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 ZBED4O75132 1171 aa22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 ZNF865P0CJ78 1059 aaPredicted RBP22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 RARBP10826 455 aa22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 HDAC1Q13547 482 aaPredicted RBP22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 SLC39A5Q6ZMH5 540 aa22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 KIFC2Q96AC6 838 aa22.99■■□□□ 1.27
HCFC1R1-204ENST00000573095 AKR1A1P14550 325 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 OAZ1P54368 228 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 TFAP4Q01664 338 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 ANKRD45Q5TZF3 282 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 EVI5LQ96CN4 794 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 XPNPEP3Q9NQH7 507 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 PRKAG2Q9UGJ0 569 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 SYNGAP1Q96PV0 1343 aa22.98■■□□□ 1.27
HCFC1R1-204ENST00000573095 BMP3P12645 472 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 TAL1P17542 331 aaPredicted RBP22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 PPP4R3BQ5MIZ7 849 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 C1orf53Q5VUE5 145 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 SLFN13Q68D06 897 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 MAMDC4Q6UXC1 1216 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 CCDC129Q6ZRS4 1044 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 CPXCR1Q8N123 301 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 LBHD1Q9BQE6 289 aaPredicted RBP22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 PHF24Q9UPV7 400 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 CNPY2Q9Y2B0 182 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 ATP11BQ9Y2G3 1177 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 CTDP1Q9Y5B0 961 aaPredicted RBP22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 MCM3APO60318 1980 aa22.97■■□□□ 1.27
HCFC1R1-204ENST00000573095 MYCNP04198 464 aaPredicted RBP22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 FDX1P10109 184 aa22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 ADCYAP1R1P41586 468 aa22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 PDE1AP54750 535 aa22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 ZNF467Q7Z7K2 595 aaPredicted RBP22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 DDX11Q96FC9 970 aa22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 GMCL1Q96IK5 515 aa22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 RAVER2Q9HCJ3 691 aaKnown RBP22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 FBXO40Q9UH90 709 aa22.96■■□□□ 1.27
HCFC1R1-204ENST00000573095 TRIM60Q495X7 471 aa22.95■■□□□ 1.26
HCFC1R1-204ENST00000573095 RNF180Q86T96 592 aa22.95■■□□□ 1.26
HCFC1R1-204ENST00000573095 CHST13Q8NET6 341 aa22.95■■□□□ 1.26
HCFC1R1-204ENST00000573095 ANAPC4Q9UJX5 808 aa22.95■■□□□ 1.26
HCFC1R1-204ENST00000573095 SNAI1O95863 264 aaPredicted RBP22.94■■□□□ 1.26
HCFC1R1-204ENST00000573095 STAT2P52630 851 aa22.94■■□□□ 1.26
HCFC1R1-204ENST00000573095 TICAM2Q86XR7 235 aa22.94■■□□□ 1.26
HCFC1R1-204ENST00000573095 HELLSQ9NRZ9 838 aa22.94■■□□□ 1.26
HCFC1R1-204ENST00000573095 LRRC37A2A6NM11 1700 aa22.94■■□□□ 1.26
HCFC1R1-204ENST00000573095 TSPY2A6NKD2 308 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 ADAMTS4O75173 837 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 PGK1P00558 417 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 CTDSPL2Q05D32 466 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 VPS53Q5VIR6 699 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 FAM160B2Q86V87 743 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 FERMT2Q96AC1 680 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 LENG1Q96BZ8 264 aaPredicted RBP22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 FGD4Q96M96 766 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 PDLIM7Q9NR12 457 aa22.93■■□□□ 1.26
HCFC1R1-204ENST00000573095 TMEM232C9JQI7 657 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 PLA2G6O60733 806 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 SLC1A4P43007 532 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 SLC4A3P48751 1232 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 AAMPQ13685 434 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 ALX1Q15699 326 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 ANKRD35Q8N283 1001 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 CHURC1Q8WUH1 139 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 IL17RBQ9NRM6 502 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 STX8Q9UNK0 236 aa22.92■■□□□ 1.26
HCFC1R1-204ENST00000573095 ZMYM6O95789 1325 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 SYNRGQ9UMZ2 1314 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 A0A1W2PQ45 241 aaPredicted RBP22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 A0A1W2PQY0 241 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 ORC4O43929 436 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 FGRP09769 529 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 NOVP48745 357 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 DEFB123Q8N688 67 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 STAG1Q8WVM7 1258 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 PRDM5Q9NQX1 630 aaPredicted RBP22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 ZHX1Q9UKY1 873 aaPredicted RBP22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 FAM184BQ9ULE4 1060 aa22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 ISY1Q9ULR0 285 aaKnown RBP22.91■■□□□ 1.26
HCFC1R1-204ENST00000573095 ZNF536O15090 1300 aa22.9■■□□□ 1.26
HCFC1R1-204ENST00000573095 A0A0D9SFI3 127 aa22.9■■□□□ 1.26
HCFC1R1-204ENST00000573095 TSEN34Q9BSV6 310 aaKnown RBP22.9■■□□□ 1.26
HCFC1R1-204ENST00000573095 ACAD9Q9H845 621 aa22.9■■□□□ 1.26
HCFC1R1-204ENST00000573095 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.9■■□□□ 1.26
HCFC1R1-204ENST00000573095 TACC3Q9Y6A5 838 aa22.9■■□□□ 1.26
HCFC1R1-204ENST00000573095 NMT2O60551 498 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms