RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 TMEM82A0PJX8 343 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 ZC3H12DA2A288 527 aaKnown RBP5.35□□□□□ -1.55
TVP23B-205ENST00000572845 SYPP08247 313 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 CTSHP09668 335 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 EPHB3P54753 998 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 CAP1Q01518 475 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 FAM129CQ86XR2 697 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 AEBP1Q8IUX7 1158 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 LINC01356Q8N9X3 169 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 RNF19AQ9NV58 838 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 GMIPQ9P107 970 aa5.35□□□□□ -1.55
TVP23B-205ENST00000572845 FADS2P1A8MWK0 482 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 SIGLEC6O43699 453 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 SORBS3O60504 671 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 UBOX5O94941 541 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 ATE1O95260 518 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 ARSHQ5FYA8 562 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 CDCP2Q5VXM1 449 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 FAM196AQ6ZSG2 479 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 FRMD5Q7Z6J6 570 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 LDHDQ86WU2 507 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 KLHL14Q9P2G3 628 aa5.34□□□□□ -1.55
TVP23B-205ENST00000572845 MINDY4BA8MYZ0 360 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 DNAJA2O60884 412 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 ADRB1P08588 477 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 CDR1P51861 262 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 CYP4F8P98187 520 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 CBX2Q14781 532 aaPredicted RBP5.33□□□□□ -1.56
TVP23B-205ENST00000572845 NR1I3Q14994 352 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 RAB3GAP1Q15042 981 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 SKOR2Q2VWA4 1001 aaPredicted RBP5.33□□□□□ -1.56
TVP23B-205ENST00000572845 BBS9Q3SYG4 887 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 HSF5Q4G112 596 aaPredicted RBP5.33□□□□□ -1.56
TVP23B-205ENST00000572845 TMC3Q7Z5M5 1100 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 EAF1Q96JC9 268 aaPredicted RBP5.33□□□□□ -1.56
TVP23B-205ENST00000572845 TRAIPQ9BWF2 469 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 LRRC3Q9BY71 257 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 EPB41L4AQ9HCS5 686 aaPredicted RBP5.33□□□□□ -1.56
TVP23B-205ENST00000572845 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 PRR13Q9NZ81 148 aa5.33□□□□□ -1.56
TVP23B-205ENST00000572845 FKTNO75072 461 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 CLEC3AO75596 197 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 PRAMEF1O95521 474 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 EFEMP2O95967 443 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 BMP8BP34820 402 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 LRRFIP1Q32MZ4 808 aaKnown RBP5.32□□□□□ -1.56
TVP23B-205ENST00000572845 SPATS1Q496A3 300 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 TMEFF1Q8IYR6 380 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 FEZF2Q8TBJ5 459 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 PWWP2AQ96N64 755 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 PLCD4Q9BRC7 762 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 CHST7Q9NS84 486 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 ACSL6Q9UKU0 697 aa5.32□□□□□ -1.56
TVP23B-205ENST00000572845 CNOT11Q9UKZ1 510 aaKnown RBP5.32□□□□□ -1.56
TVP23B-205ENST00000572845 F6X3S4 739 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 PRKCAP17252 672 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 PFKLP17858 780 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 FAM160A1Q05DH4 1040 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 TARBP2Q15633 366 aaKnown RBP5.31□□□□□ -1.56
TVP23B-205ENST00000572845 TMC6Q7Z403 805 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 IGDCC3Q8IVU1 814 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 ZDHHC14Q8IZN3 488 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 PRDM14Q9GZV8 571 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 CNNM2Q9H8M5 875 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 EHMT1Q9H9B1 1298 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 SUPT16HQ9Y5B9 1047 aaKnown RBP5.31□□□□□ -1.56
TVP23B-205ENST00000572845 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 PCDHA5Q9Y5H7 936 aa5.31□□□□□ -1.56
TVP23B-205ENST00000572845 A0A1W2PQ27 194 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 A0A1W2PQ64 194 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 A0A1W2PQC6 194 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 A0A1W2PQD8 194 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 BUB1BO60566 1050 aaPredicted RBP5.3□□□□□ -1.56
TVP23B-205ENST00000572845 SDHBP21912 280 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 GARTP22102 1010 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 SND1Q7KZF4 910 aaKnown RBP eCLIP5.3□□□□□ -1.56
TVP23B-205ENST00000572845 SLCO6A1Q86UG4 719 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 REXO1Q8N1G1 1221 aaKnown RBP5.3□□□□□ -1.56
TVP23B-205ENST00000572845 BRMS1Q9HCU9 246 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 KCNQ5Q9NR82 932 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 VTI1BQ9UEU0 232 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 GPR55Q9Y2T6 319 aaPredicted RBP5.3□□□□□ -1.56
TVP23B-205ENST00000572845 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
TVP23B-205ENST00000572845 IRS2Q9Y4H2 1338 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 GREM1O60565 184 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 ZNF205O95201 554 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 EIF4A3P38919 411 aaKnown RBP5.29□□□□□ -1.56
TVP23B-205ENST00000572845 KCNC1P48547 511 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 MAPKAPK2P49137 400 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 PLP2Q04941 152 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 SNW1Q13573 536 aaKnown RBP5.29□□□□□ -1.56
TVP23B-205ENST00000572845 VMACQ2NL98 169 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 ZC3H14Q6PJT7 736 aaKnown RBP5.29□□□□□ -1.56
TVP23B-205ENST00000572845 ZPBP2Q6X784 338 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 NLRC3Q7RTR2 1065 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 NUP43Q8NFH3 380 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 FBXO27Q8NI29 283 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 CDADC1Q9BWV3 514 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 TNFRSF12AQ9NP84 129 aa5.29□□□□□ -1.56
TVP23B-205ENST00000572845 ERVK13-1Q9NX77 482 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms