RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 GPR52Q9Y2T5 361 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 SLC12A7Q9Y666 1083 aa5.88□□□□□ -1.47
TOPBP1-210ENST00000572787 TRBV23-1A0A0A0MS06 115 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 TRIM75PA6NK02 468 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 UPK3BL1B0FP48 263 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM155AB1AL88 458 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 UPK3BL2E5RIL1 263 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 NCAM2O15394 837 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 GFPT2O94808 682 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 F13A1P00488 732 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 GYS1P13807 737 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 KIF5BP33176 963 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 KRT20P35900 424 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 FAPQ12884 760 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 TEAD4Q15561 434 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 MSS51Q4VC12 460 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 RILPL1Q5EBL4 403 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM209AQ5JX71 171 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 TTBK2Q6IQ55 1244 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 LAPTM4BQ86VI4 370 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 SCUBE1Q8IWY4 988 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 TAB3Q8N5C8 712 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 NBPF15Q8N660 670 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 OR2W6PQ8NHA6 318 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 DEPTORQ8TB45 409 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 ZMAT2Q96NC0 199 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 SEC62Q99442 399 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 SLC26A6Q9BXS9 759 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 WDR12Q9GZL7 423 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 EHD4Q9H223 541 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 BRMS1Q9HCU9 246 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 ARGLU1Q9NWB6 273 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 SEL1LQ9UBV2 794 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 TSR3Q9UJK0 312 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 HDAC5Q9UQL6 1122 aa5.87□□□□□ -1.47
TOPBP1-210ENST00000572787 M0R3H8 397 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CPLX1O14810 134 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 AREL1O15033 823 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 SUSD5O60279 629 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 RNF40O75150 1001 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 FBXO24O75426 580 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 DDX58O95786 925 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CPP00450 1065 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CD4P01730 458 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 PYGLP06737 847 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CLNS1AP54105 237 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 USP14P54578 494 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 RAB15P59190 212 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CLCQ05315 142 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 PSMD6Q15008 389 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 PLCB4Q15147 1175 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 TERF2Q15554 542 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 SEPT7Q16181 437 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CCNG2Q16589 344 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM98CQ17RN3 349 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CYP26C1Q6V0L0 522 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 BNC2Q6ZN30 1099 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CCDC73Q6ZRK6 1079 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 SAMD7Q7Z3H4 446 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 ERC1Q8IUD2 1116 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 COLGALT2Q8IYK4 626 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 TRMT44Q8IYL2 757 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 SLFN12Q8IYM2 578 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 C7orf61Q8IZ16 206 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CBARPQ8N350 705 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 KCT2Q8NC54 265 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 FLCNQ8NFG4 579 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 NSUN6Q8TEA1 469 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 HSPBAP1Q96EW2 488 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 DDX11Q96FC9 970 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 RSRC1Q96IZ7 334 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 ZFRQ96KR1 1074 aaKnown RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 CFAP53Q96M91 514 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 MAP3K14Q99558 947 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 TM9SF2Q99805 663 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 C1QTNF2Q9BXJ5 285 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 MTFR1LQ9H019 292 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 LMAN2LQ9H0V9 348 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 SLC12A5Q9H2X9 1139 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 EHMT1Q9H9B1 1298 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 DBNDD1Q9H9R9 158 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 ARFGAP3Q9NP61 516 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 AAASQ9NRG9 546 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 TOPORSQ9NS56 1045 aaPredicted RBP5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 EPS15L1Q9UBC2 864 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 ZNF232Q9UNY5 417 aa5.86□□□□□ -1.47
TOPBP1-210ENST00000572787 TRAV20A0A0B4J274 112 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 FAM221AA4D161 298 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 CTNND1O60716 968 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 PRKD3O94806 890 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ZBED1O96006 694 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 GNRH1P01148 92 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ASLP04424 464 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 CELA3AP09093 270 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 GALNSP34059 522 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 MMP16P51512 607 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 ZNF132P52740 706 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 COPAP53621 1224 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 NRLP54845 237 aa5.85□□□□□ -1.47
TOPBP1-210ENST00000572787 KRT85P78386 507 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms