RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
GTF3C1-213ENST00000571886 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
GTF3C1-213ENST00000571886 SGPL1O95470 568 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 IGHA2P01877 340 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 TAL1P17542 331 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 SLC16A2P36021 539 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 GJA8P48165 433 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 U2AF1L4Q8WU68 220 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 ESR2Q92731 530 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 MAP4K1Q92918 833 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 DEFB118Q96PH6 123 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 APBA2Q99767 749 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 ESYT1Q9BSJ8 1104 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 LSG1Q9H089 658 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 MROH8Q9H579 483 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 SLC38A10Q9HBR0 1119 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 ZNF536O15090 1300 aa12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-213ENST00000571886 PLXNA1Q9UIW2 1896 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 STRNO43815 780 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 ZBED4O75132 1171 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 SLC25A27O95847 323 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 PGK2P07205 417 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 HOXC6P09630 235 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 PDHBP11177 359 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 CYP2C19P33261 490 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 COL9A3Q14050 684 aaPredicted RBP12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 BMP2KLQ5H9B9 411 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 SNRNP48Q6IEG0 339 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 STOX1Q6ZVD7 989 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 DPP9Q86TI2 863 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 TRPV1Q8NER1 839 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 AGBL1Q96MI9 1066 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 TTC14Q96N46 770 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 MMP19Q99542 508 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 PRR12Q9ULL5 1215 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 ZNF236Q9UL36 1845 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 RPTORQ8N122 1335 aa12.06□□□□□ -0.48
GTF3C1-213ENST00000571886 ATP2A1O14983 1001 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 PLA2G6O60733 806 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 FCER1AP12319 257 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 STAT2P52630 851 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 CCDC96Q2M329 555 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 FAM160B2Q86V87 743 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 ENAHQ8N8S7 591 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 CHURC1Q8WUH1 139 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 ANKS1AQ92625 1134 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 TEX13BQ9BXU2 312 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 CRISPLD2Q9H0B8 497 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 CPVLQ9H3G5 476 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 SENP2Q9HC62 589 aa12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 HMX1Q9NP08 348 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 MKI67P46013 3256 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-213ENST00000571886 E7EWF7 191 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 TFRCP02786 760 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 NEFLP07196 543 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 GOLGA8HP0CJ92 632 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 SNHG28P0DPA3 235 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 SEC23AQ15436 765 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 ZNF792Q3KQV3 632 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 CCDC174Q6PII3 467 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 BTNL9Q6UXG8 535 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 CHST3Q7LGC8 479 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 ABRAQ8N0Z2 381 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 MAML3Q96JK9 1138 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 ZSCAN10Q96SZ4 725 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 KRT23Q9C075 422 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 TNKSO95271 1327 aa12.04□□□□□ -0.48
GTF3C1-213ENST00000571886 ZNF543Q08ER8 600 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 NECTIN1Q15223 517 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 SYDE2Q5VT97 1194 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 LHX8Q68G74 356 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 PNMA1Q8ND90 353 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 DIS3LQ8TF46 1054 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 UBA5Q9GZZ9 404 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 HOMER2Q9NSB8 354 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 CTDP1Q9Y5B0 961 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 MCM3APO60318 1980 aa12.03□□□□□ -0.48
GTF3C1-213ENST00000571886 DNAJC25-GNG10A0A024R161 153 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms