RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TACO1Q9BSH4 297 aaKnown RBP17.26■□□□□ 0.35
SMG6-207ENST00000570756 RNF26Q9BY78 433 aaPredicted RBP17.26■□□□□ 0.35
SMG6-207ENST00000570756 TSGA10Q9BZW7 698 aa17.26■□□□□ 0.35
SMG6-207ENST00000570756 H0YHG0 523 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 NDUFAB1O14561 156 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 EPHB4P54760 987 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 CTDSPL2Q05D32 466 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 PPP2R5BQ15173 497 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 MEA1Q16626 185 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 EMBQ6PCB8 327 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 MICALCLQ6ZW33 695 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 FANCBQ8NB91 859 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 PIH1D3Q9NQM4 214 aaKnown RBP17.25■□□□□ 0.35
SMG6-207ENST00000570756 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 MYH6P13533 1939 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 GLI3P10071 1580 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 HSF2BPO75031 334 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 PARP1P09874 1014 aaKnown RBP17.25■□□□□ 0.35
SMG6-207ENST00000570756 EEF1GP26641 437 aaKnown RBP17.25■□□□□ 0.35
SMG6-207ENST00000570756 OTUD6BQ8N6M0 293 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 BLZF1Q9H2G9 400 aa17.25■□□□□ 0.35
SMG6-207ENST00000570756 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
SMG6-207ENST00000570756 MEGF6O75095 1541 aa17.24■□□□□ 0.35
SMG6-207ENST00000570756 PDE2AO00408 941 aaPredicted RBP17.24■□□□□ 0.35
SMG6-207ENST00000570756 WDR59Q6PJI9 974 aa17.24■□□□□ 0.35
SMG6-207ENST00000570756 A1CFQ9NQ94 594 aaKnown RBP17.24■□□□□ 0.35
SMG6-207ENST00000570756 CAPN7Q9Y6W3 813 aa17.24■□□□□ 0.35
SMG6-207ENST00000570756 PES1O00541 588 aaKnown RBP17.23■□□□□ 0.35
SMG6-207ENST00000570756 ZNF185O15231 689 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 KIF5AQ12840 1032 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 ZNF572Q7Z3I7 529 aaPredicted RBP17.23■□□□□ 0.35
SMG6-207ENST00000570756 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 STAMQ92783 540 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
SMG6-207ENST00000570756 PURBQ96QR8 312 aaKnown RBP17.23■□□□□ 0.35
SMG6-207ENST00000570756 NUP58Q9BVL2 599 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 EHD4Q9H223 541 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 RIC1Q4ADV7 1423 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 ABCA3Q99758 1704 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 FSBPO95073 299 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 CCDC172P0C7W6 258 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 RRP12Q5JTH9 1297 aaKnown RBP17.23■□□□□ 0.35
SMG6-207ENST00000570756 ZNF654Q8IZM8 581 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 CMTR1Q8N1G2 835 aaKnown RBP17.23■□□□□ 0.35
SMG6-207ENST00000570756 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 TRIM58Q8NG06 486 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 STAG1Q8WVM7 1258 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 VPS54Q9P1Q0 977 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 DISP2A7MBM2 1401 aa17.23■□□□□ 0.35
SMG6-207ENST00000570756 PDS5AQ29RF7 1337 aaKnown RBP17.23■□□□□ 0.35
SMG6-207ENST00000570756 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 ZEB2O60315 1214 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 DNM2P50570 870 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.22■□□□□ 0.35
SMG6-207ENST00000570756 PHF20Q9BVI0 1012 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 EPB41L4AQ9HCS5 686 aaPredicted RBP17.22■□□□□ 0.35
SMG6-207ENST00000570756 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
SMG6-207ENST00000570756 SNX12Q9UMY4 172 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 TFR2Q9UP52 801 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 SAMM50Q9Y512 469 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 CYP27B1O15528 508 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 MEFVO15553 781 aaPredicted RBP17.22■□□□□ 0.35
SMG6-207ENST00000570756 RPN1P04843 607 aaKnown RBP17.22■□□□□ 0.35
SMG6-207ENST00000570756 ATP2C1P98194 919 aaPredicted RBP17.22■□□□□ 0.35
SMG6-207ENST00000570756 DDR1Q08345 913 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 LACRTQ9GZZ8 138 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 RABEP2Q9H5N1 569 aa17.22■□□□□ 0.35
SMG6-207ENST00000570756 NHEJ1Q9H9Q4 299 aaPredicted RBP17.22■□□□□ 0.35
SMG6-207ENST00000570756 RTL9Q8NET4 1388 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 KIF1CO43896 1103 aaKnown RBP17.21■□□□□ 0.35
SMG6-207ENST00000570756 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 PRLRP16471 622 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 TTC38Q5R3I4 469 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 YTHDF3Q7Z739 585 aaKnown RBP17.21■□□□□ 0.35
SMG6-207ENST00000570756 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 CAVIN3Q969G5 261 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
SMG6-207ENST00000570756 ZKSCAN3Q9BRR0 538 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 PRDM11Q9NQV5 511 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 MACROD2A1Z1Q3 448 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 TACC1O75410 805 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 TRIM21P19474 475 aaKnown RBP17.21■□□□□ 0.35
SMG6-207ENST00000570756 PRCPP42785 496 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 VAV2P52735 878 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 APBA1Q02410 837 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 ZNF174Q15697 407 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 CREG2Q8IUH2 290 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
SMG6-207ENST00000570756 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
SMG6-207ENST00000570756 RNF41Q9H4P4 317 aaPredicted RBP17.21■□□□□ 0.35
SMG6-207ENST00000570756 USO1O60763 962 aaKnown RBP17.2■□□□□ 0.34
SMG6-207ENST00000570756 CSF1RP07333 972 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms