RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 JAK2O60674 1132 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 TSPY3P0CV98 308 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 TSPY8P0CW00 308 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 ZNF654Q8IZM8 581 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 ZNF444Q8N0Y2 327 aaPredicted RBP11.69□□□□□ -0.54
GDE1-205ENST00000569899 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
GDE1-205ENST00000569899 CSRNP1Q96S65 589 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 PLA2G2EQ9NZK7 142 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 CHMP5Q9NZZ3 219 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 SMC3Q9UQE7 1217 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 SCN4AP35499 1836 aa11.69□□□□□ -0.54
GDE1-205ENST00000569899 GOLGA8AA7E2F4 631 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 H7C1D1 291 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 ZBTB43O43298 467 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 CTDNEP1O95476 244 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 AKR1B1P15121 316 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 GJB2P29033 226 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 EPS15P42566 896 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 METAP2P50579 478 aaKnown RBP eCLIP11.68□□□□□ -0.54
GDE1-205ENST00000569899 PKP1Q13835 747 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 IFIT1BQ5T764 474 aaKnown RBP11.68□□□□□ -0.54
GDE1-205ENST00000569899 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 RCSD1Q6JBY9 416 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
GDE1-205ENST00000569899 FAM151AQ8WW52 585 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
GDE1-205ENST00000569899 PI4KBQ9UBF8 816 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 SLC12A7Q9Y666 1083 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 NT5C2P49902 561 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
GDE1-205ENST00000569899 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 NEDD1Q8NHV4 660 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
GDE1-205ENST00000569899 WDR90Q96KV7 1748 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 DOCK1Q14185 1865 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 PTPDC1A2A3K4 754 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 CCNYL3P0C7X3 344 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 CDC27P30260 824 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
GDE1-205ENST00000569899 CEP95Q96GE4 821 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 TCP11L1Q9NUJ3 509 aa11.67□□□□□ -0.54
GDE1-205ENST00000569899 OTOFQ9HC10 1997 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
GDE1-205ENST00000569899 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
GDE1-205ENST00000569899 TNNI2P48788 182 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 RASA3Q14644 834 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 SYNE3Q6ZMZ3 975 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 TMTC2Q8N394 836 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 SMARCC2Q8TAQ2 1214 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 GGA3Q9NZ52 723 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 FCF1Q9Y324 198 aaKnown RBP11.66□□□□□ -0.54
GDE1-205ENST00000569899 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
GDE1-205ENST00000569899 PAPPA2Q9BXP8 1791 aa11.66□□□□□ -0.54
GDE1-205ENST00000569899 IGKV6D-41A0A0C4DH26 115 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
GDE1-205ENST00000569899 DDAH1O94760 285 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 GDF11O95390 407 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
GDE1-205ENST00000569899 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
GDE1-205ENST00000569899 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 RTN1Q16799 776 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 ANGEL2Q5VTE6 544 aaKnown RBP11.65□□□□□ -0.54
GDE1-205ENST00000569899 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 RASGRP2Q7LDG7 609 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
GDE1-205ENST00000569899 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 LLPHQ9BRT6 129 aaKnown RBP11.65□□□□□ -0.54
GDE1-205ENST00000569899 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 STX8Q9UNK0 236 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 TCHHQ07283 1943 aa11.65□□□□□ -0.54
GDE1-205ENST00000569899 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.55
GDE1-205ENST00000569899 CPLX1O14810 134 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 GGCXP38435 758 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 RCAN1P53805 252 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 TROAPQ12815 778 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 RRP1BQ14684 758 aaKnown RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 RAB3GAP1Q15042 981 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 CCDC178Q5BJE1 867 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 DGKHQ86XP1 1220 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 ANKS1AQ92625 1134 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 TEPSINQ96N21 525 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms