RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 USP17L17D6RBQ6 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L19D6RCP7 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L20D6RJB6 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 CYTH3O43739 400 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 JAK2O60674 1132 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 CDKL5O76039 1030 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 USP17L24Q0WX57 530 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 GPAT2Q6NUI2 795 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 BTNL9Q6UXG8 535 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 ADGRF4Q8IZF3 695 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 CHURC1Q8WUH1 139 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 KIFC2Q96AC6 838 aa14.32□□□□□ -0.12
NUP93-220ENST00000569842 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
NUP93-220ENST00000569842 PTPDC1A2A3K4 754 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 SYDE2Q5VT97 1194 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 CATSPERGQ6ZRH7 1159 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 FAM160B2Q86V87 743 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 SLC26A6Q9BXS9 759 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.31□□□□□ -0.12
NUP93-220ENST00000569842 CNTNAP5Q8WYK1 1306 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 hCG_1642624A0A1W2PR95 340 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 PLA2G6O60733 806 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 SLF1Q9BQI6 1058 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 RIOX1Q9H6W3 641 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 DAXXQ9UER7 740 aaPredicted RBP14.31□□□□□ -0.12
NUP93-220ENST00000569842 PRR12Q9ULL5 1215 aa14.31□□□□□ -0.12
NUP93-220ENST00000569842 V9GY48 417 aaPredicted RBP14.31□□□□□ -0.12
NUP93-220ENST00000569842 MANSC4A6NHS7 340 aaPredicted RBP14.3□□□□□ -0.12
NUP93-220ENST00000569842 SMARCA1P28370 1054 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 HOXA7P31268 230 aaPredicted RBP14.3□□□□□ -0.12
NUP93-220ENST00000569842 SSRP1Q08945 709 aaKnown RBP14.3□□□□□ -0.12
NUP93-220ENST00000569842 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
NUP93-220ENST00000569842 CAPNS2Q96L46 248 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 JMJD4Q9H9V9 463 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 BTBD19C9JJ37 291 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 HOMER1Q86YM7 354 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 PRPF38AQ8NAV1 312 aaKnown RBP14.3□□□□□ -0.12
NUP93-220ENST00000569842 ZIC5Q96T25 663 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 PTPN18Q99952 460 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 PPP1R9AQ9ULJ8 1098 aa14.3□□□□□ -0.12
NUP93-220ENST00000569842 LOC285556D6RIA3 1793 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 TESPA1A2RU30 521 aaPredicted RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 FMNL1O95466 1100 aaPredicted RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 SNAP25P60880 206 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 PABPC4Q13310 644 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■■□□ 15.1
NUP93-220ENST00000569842 COG2Q14746 738 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 TRIM22Q8IYM9 498 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 SMARCC2Q8TAQ2 1214 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 PIGSQ96S52 555 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 SMC3Q9UQE7 1217 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 IRX3P78415 501 aaPredicted RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 AKAP17AQ02040 695 aaKnown RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
NUP93-220ENST00000569842 RRP36Q96EU6 259 aaKnown RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 ASCC2Q9H1I8 757 aaPredicted RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 ORC3Q9UBD5 711 aaPredicted RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 BAZ2BQ9UIF8 2168 aaKnown RBP14.29□□□□□ -0.12
NUP93-220ENST00000569842 PDHXO00330 501 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 AOC2O75106 756 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 FDPSP14324 419 aaKnown RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 C1QTNF8P60827 252 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 KIF23Q02241 960 aaPredicted RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 NOGQ13253 232 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 ANKRD23Q86SG2 305 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 IPO9Q96P70 1041 aaKnown RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 GJB2P29033 226 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 DSG3P32926 999 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 P2RX7Q99572 595 aaKnown RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 HOXC10Q9NYD6 342 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 OSBPP22059 807 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 INHBEP58166 350 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 CDC37Q16543 378 aaPredicted RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 MTMR8Q96EF0 704 aa14.28□□□□□ -0.12
NUP93-220ENST00000569842 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
NUP93-220ENST00000569842 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.12
NUP93-220ENST00000569842 IGF2BP3O00425 579 aaKnown RBP eCLIP14.27□□□□□ -0.12
NUP93-220ENST00000569842 SREBF2Q12772 1141 aa14.27□□□□□ -0.12
NUP93-220ENST00000569842 STK36Q9NRP7 1315 aa14.27□□□□□ -0.12
NUP93-220ENST00000569842 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.12
NUP93-220ENST00000569842 VWA5AO00534 786 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 ZBTB5O15062 677 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 DEXIO95424 95 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 CYP2C8P10632 490 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 PKN1Q16512 942 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 QRICH1Q2TAL8 776 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 FAM184AQ8NB25 1140 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 AIFM3Q96NN9 605 aa14.27□□□□□ -0.13
NUP93-220ENST00000569842 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.13
NUP93-220ENST00000569842 MYPNQ86TC9 1320 aa14.26□□□□□ -0.13
NUP93-220ENST00000569842 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
NUP93-220ENST00000569842 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
NUP93-220ENST00000569842 HSPA6P17066 643 aa14.26□□□□□ -0.13
NUP93-220ENST00000569842 VEGFBP49765 207 aa14.26□□□□□ -0.13
NUP93-220ENST00000569842 CCDC174Q6PII3 467 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms