RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
CHD9-220ENST00000569794 ADAMTS20P59510 1910 aa8.46□□□□□ -1.05
CHD9-220ENST00000569794 FADS2P1A8MWK0 482 aa8.46□□□□□ -1.06
CHD9-220ENST00000569794 TLR3O15455 904 aaKnown RBP8.46□□□□□ -1.06
CHD9-220ENST00000569794 SIGLEC6O43699 453 aa8.46□□□□□ -1.06
CHD9-220ENST00000569794 KRTAP10-2P60368 255 aa8.46□□□□□ -1.06
CHD9-220ENST00000569794 SND1Q7KZF4 910 aaKnown RBP eCLIP8.46□□□□□ -1.06
CHD9-220ENST00000569794 FEZF2Q8TBJ5 459 aa8.46□□□□□ -1.06
CHD9-220ENST00000569794 FCRL2Q96LA5 508 aaPredicted RBP8.46□□□□□ -1.06
CHD9-220ENST00000569794 KLHL14Q9P2G3 628 aa8.46□□□□□ -1.06
CHD9-220ENST00000569794 SORBS3O60504 671 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 MPOP05164 745 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 POLR2BP30876 1174 aaKnown RBP8.45□□□□□ -1.06
CHD9-220ENST00000569794 RAD51AP2Q09MP3 1159 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 KIR3DS1Q14943 382 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 VMACQ2NL98 169 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 CWF19L2Q2TBE0 894 aaKnown RBP8.45□□□□□ -1.06
CHD9-220ENST00000569794 HSF5Q4G112 596 aaPredicted RBP8.45□□□□□ -1.06
CHD9-220ENST00000569794 GALNT18Q6P9A2 607 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 CNKSR3Q6P9H4 555 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 DBX2Q6ZNG2 339 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 LRRC3Q9BY71 257 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 PRDM14Q9GZV8 571 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 PCDHB14Q9Y5E9 798 aa8.45□□□□□ -1.06
CHD9-220ENST00000569794 ATE1O95260 518 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 CDCP2Q5VXM1 449 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 OVOS1Q6IE37 1185 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 FBXO33Q7Z6M2 555 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 FAM129CQ86XR2 697 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 IGDCC3Q8IVU1 814 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 SP8Q8IXZ3 490 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 BRMS1Q9HCU9 246 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 MINPP1Q9UNW1 487 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 GPR55Q9Y2T6 319 aaPredicted RBP8.44□□□□□ -1.06
CHD9-220ENST00000569794 TAF6LQ9Y6J9 622 aa8.44□□□□□ -1.06
CHD9-220ENST00000569794 WTIPA6NIX2 430 aaPredicted RBP8.43□□□□□ -1.06
CHD9-220ENST00000569794 ARL4AP40617 200 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 FBXL19Q6PCT2 694 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 DNAJC14Q6Y2X3 702 aaPredicted RBP8.43□□□□□ -1.06
CHD9-220ENST00000569794 TMC6Q7Z403 805 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 LDHDQ86WU2 507 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 KCNQ5Q9NR82 932 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 KBTBD4Q9NVX7 518 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 VTI1BQ9UEU0 232 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
CHD9-220ENST00000569794 CELA3BP08861 270 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 LAPTM5Q13571 262 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 ERMP1Q7Z2K6 904 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 PRRT2Q7Z6L0 340 aaPredicted RBP8.42□□□□□ -1.06
CHD9-220ENST00000569794 SLCO6A1Q86UG4 719 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 ZDHHC14Q8IZN3 488 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 CNNM2Q9H8M5 875 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 LUC7LQ9NQ29 371 aaKnown RBP8.42□□□□□ -1.06
CHD9-220ENST00000569794 CHST7Q9NS84 486 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 ERVK13-1Q9NX77 482 aa8.42□□□□□ -1.06
CHD9-220ENST00000569794 CLEC3AO75596 197 aa8.41□□□□□ -1.06
CHD9-220ENST00000569794 CEBPAP49715 358 aaPredicted RBP8.41□□□□□ -1.06
CHD9-220ENST00000569794 TMEM62Q0P6H9 643 aa8.41□□□□□ -1.06
CHD9-220ENST00000569794 ZNF512BQ96KM6 892 aaPredicted RBP8.41□□□□□ -1.06
CHD9-220ENST00000569794 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
CHD9-220ENST00000569794 PCDHA5Q9Y5H7 936 aa8.41□□□□□ -1.06
CHD9-220ENST00000569794 GREM1O60565 184 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 PRKCAP17252 672 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 ENDOUP21128 410 aaKnown RBP8.4□□□□□ -1.06
CHD9-220ENST00000569794 RAB3GAP1Q15042 981 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 LINC01356Q8N9X3 169 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 ATG4CQ96DT6 458 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 PWWP2AQ96N64 755 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 EHMT1Q9H9B1 1298 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 TNFRSF12AQ9NP84 129 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 COPRSQ9NQ92 184 aa8.4□□□□□ -1.06
CHD9-220ENST00000569794 A0A1W2PQ45 241 aaPredicted RBP8.39□□□□□ -1.07
CHD9-220ENST00000569794 A0A1W2PQY0 241 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 ZNF205O95201 554 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 CCNFP41002 786 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 CTSKP43235 329 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 CYP4F8P98187 520 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 NFKB2Q00653 900 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 CBX2Q14781 532 aaPredicted RBP8.39□□□□□ -1.07
CHD9-220ENST00000569794 NLRC3Q7RTR2 1065 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 TEPSINQ96N21 525 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 ACSL6Q9UKU0 697 aa8.39□□□□□ -1.07
CHD9-220ENST00000569794 SUPT16HQ9Y5B9 1047 aaKnown RBP8.39□□□□□ -1.07
CHD9-220ENST00000569794 NUDT19A8MXV4 375 aa8.38□□□□□ -1.07
CHD9-220ENST00000569794 MEIS1O00470 390 aa8.38□□□□□ -1.07
CHD9-220ENST00000569794 BMP8BP34820 402 aa8.38□□□□□ -1.07
CHD9-220ENST00000569794 CRKP46108 304 aa8.38□□□□□ -1.07
CHD9-220ENST00000569794 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
CHD9-220ENST00000569794 CDADC1Q9BWV3 514 aa8.38□□□□□ -1.07
CHD9-220ENST00000569794 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
CHD9-220ENST00000569794 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
CHD9-220ENST00000569794 NCKAP1LP55160 1127 aa8.37□□□□□ -1.07
CHD9-220ENST00000569794 RPTNQ6XPR3 784 aa8.37□□□□□ -1.07
CHD9-220ENST00000569794 TMEM192Q8IY95 271 aa8.37□□□□□ -1.07
CHD9-220ENST00000569794 TP53I13Q8NBR0 393 aaPredicted RBP8.37□□□□□ -1.07
CHD9-220ENST00000569794 NUP43Q8NFH3 380 aa8.37□□□□□ -1.07
CHD9-220ENST00000569794 GFOD1Q9NXC2 390 aa8.37□□□□□ -1.07
CHD9-220ENST00000569794 ZC3H12DA2A288 527 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms