RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 DPP9Q86TI2 863 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 SDR42E1Q8WUS8 393 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 SHISA4Q96DD7 197 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 PAWRQ96IZ0 340 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 C12orf42Q96LP6 360 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 APBA2Q99767 749 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 HAUS7Q99871 368 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 PPP1R12CQ9BZL4 782 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 TANGO6Q9C0B7 1094 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 RPAP3Q9H6T3 665 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 ARMT1Q9H993 441 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 ZNF287Q9HBT7 754 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 TXNRD2Q9NNW7 524 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 DCP1AQ9NPI6 582 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 SLC4A4Q9Y6R1 1079 aa5.59□□□□□ -1.51
HERPUD1-213ENST00000568358 MKI67P46013 3256 aaKnown RBP5.59□□□□□ -1.52
HERPUD1-213ENST00000568358 CEP290O15078 2479 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 HTTP42858 3142 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 TCRBV5S4A2TA0A5A2 114 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 USP17L12C9JPN9 530 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 USP17L21D6R901 530 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 ERC2O15083 957 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 MSCO60682 206 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 FLOT1O75955 427 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 MBD4O95243 580 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 APPP05067 770 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 ADD2P35612 726 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 MDM2Q00987 491 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 ICA1Q05084 483 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 CACNB2Q08289 660 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 PLS1Q14651 629 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 SIRT2Q8IXJ6 389 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 LCORLQ8N3X6 602 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 MB21D1Q8N884 522 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 ACER1Q8TDN7 264 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 TRIB2Q92519 343 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 LPAR1Q92633 364 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 C11orf49Q9H6J7 331 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 KANSL2Q9H9L4 492 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 MKNK2Q9HBH9 465 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 ECHDC1Q9NTX5 307 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 CTDP1Q9Y5B0 961 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 PLXNB2O15031 1838 aa5.58□□□□□ -1.52
HERPUD1-213ENST00000568358 SMCHD1A6NHR9 2005 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 A0A1W2PPC1 479 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 SMARCA5O60264 1052 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 GPR37L1O60883 481 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 SLC25A27O95847 323 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 ZFYP08048 801 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 SLC3A2P08195 630 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 NUDT7P0C024 238 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 GNAT2P19087 354 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 PTPREP23469 700 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 CDK8P49336 464 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 FXR1P51114 621 aaKnown RBP eCLIP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 GABPAQ06546 454 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 TRIM32Q13049 653 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 MORN1Q5T089 497 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 C12orf60Q5U649 245 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 LBX2Q6XYB7 198 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 UBE2Q1Q7Z7E8 422 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 NCAPG2Q86XI2 1143 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 C7orf61Q8IZ16 206 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 ZNF444Q8N0Y2 327 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 KHSRPQ92945 711 aaKnown RBP eCLIP5.57□□□□□ -1.522e-11■■□□□ 11.7
HERPUD1-213ENST00000568358 DYNLL2Q96FJ2 89 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 NACAP1Q9BZK3 213 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 PORCNQ9H237 461 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 MROH8Q9H579 483 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 DCTPP1Q9H773 170 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 NPDC1Q9NQX5 325 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 RBM27Q9P2N5 1060 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 ARPP21Q9UBL0 812 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 OGDHLQ9ULD0 1010 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 PCDHGA4Q9Y5G9 962 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 BRCA2P51587 3418 aa5.57□□□□□ -1.52
HERPUD1-213ENST00000568358 MYH4Q9Y623 1939 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 MINDY4BA8MYZ0 360 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 WDR46O15213 610 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 RNF113AO15541 343 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 PRKAB2O43741 272 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 PEX10O60683 326 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 CYP2D6P10635 497 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 FCER1AP12319 257 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 CCND3P30281 292 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 GUCY1A2P33402 732 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 COPB2P35606 906 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 ABL2P42684 1182 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 TDO2P48775 406 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 LSM11P83369 360 aaKnown RBP eCLIP5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 GRB14Q14449 540 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 CCL14Q16627 93 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 MAP3K21Q5TCX8 1036 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 C20orf194Q5TEA3 1177 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 B4GALNT3Q6L9W6 998 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 GIMAP6Q6P9H5 292 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 CTR9Q6PD62 1173 aa5.56□□□□□ -1.52
HERPUD1-213ENST00000568358 C16orf86Q6ZW13 317 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms