RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 TNFRSF10CO14798 259 aa11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 SCAMP3O14828 347 aaKnown RBP11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 MESP2Q0VG99 397 aa11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 FAM84AQ96KN4 292 aa11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 SLC38A3Q99624 504 aa11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 HDAC8Q9BY41 377 aa11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 DDX41Q9UJV9 622 aaKnown RBP11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 TEX14Q8IWB6 1497 aa11.25□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 RACK1P63244 317 aaKnown RBP11.24□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 TEKQ02763 1124 aa11.24□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 PRR23BQ6ZRT6 265 aa11.24□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 ZNF512BQ96KM6 892 aaPredicted RBP11.24□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 IMPDH2P12268 514 aa11.23□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 TMC3Q7Z5M5 1100 aa11.23□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 TMEM192Q8IY95 271 aa11.23□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 OXR1Q8N573 874 aa11.23□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 DAGLBQ8NCG7 672 aa11.23□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 TRHRP34981 398 aaPredicted RBP11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 SNW1Q13573 536 aaKnown RBP11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 ZNF124Q15973 351 aa11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 PKN1Q16512 942 aa11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 CD109Q6YHK3 1445 aa11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 ZNF655Q8N720 491 aaPredicted RBP11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 SLC9A7Q96T83 725 aa11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 SP110Q9HB58 689 aa11.22□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 FITM1A5D6W6 292 aa11.21□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 DUSP4Q13115 394 aa11.21□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 INTS3Q68E01 1043 aaKnown RBP11.21□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 USHBP1Q8N6Y0 703 aa11.21□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 TCTN2Q96GX1 697 aa11.21□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 FERD3LQ96RJ6 166 aa11.21□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 C19orf44Q9H6X5 657 aa11.21□□□□□ -0.61
DNAAF4-CCPG1-202ENST00000568310 ATP10BO94823 1461 aa11.2□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 RNF111Q6ZNA4 994 aa11.2□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 LILRA2Q8N149 483 aa11.2□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 PRDM14Q9GZV8 571 aa11.2□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 MKRN2Q9H000 416 aaKnown RBP11.2□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 ZNF281Q9Y2X9 895 aa11.2□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 EEA1Q15075 1411 aa11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 PRAMEF1O95521 474 aa11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 NR0B2Q15466 257 aa11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 SPPL2CQ8IUH8 684 aa11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 ZNF654Q8IZM8 581 aa11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 MRRFQ96E11 262 aaKnown RBP11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 DIRC2Q96SL1 478 aa11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 CFAP43Q8NDM7 1665 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 SIGLEC6O43699 453 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 ACRP10323 421 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 RPL10P27635 214 aaKnown RBP11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 PCBP3P57721 371 aaKnown RBP11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 CHRNEQ04844 493 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 BHLHE22Q8NFJ8 381 aaPredicted RBP11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 DHRS1Q96LJ7 313 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 FOXP3Q9BZS1 431 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 RNF32Q9H0A6 362 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 EBF1Q9UH73 591 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 TCFL5Q9UL49 500 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 SAMD9Q5K651 1589 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 ADGRL1O94910 1474 aa11.18□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 SSU72P8A0A1W2PR75 194 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 FZD5Q13467 585 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 ANKS4BQ8N8V4 417 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 LINC00116Q8NCU8 138 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 LINC01599Q8WXQ3 324 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 TM9SF2Q99805 663 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 FHOD3Q2V2M9 1422 aa11.17□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 FAM86C2PA6NEL3 165 aa11.16□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 TIGD5Q53EQ6 642 aa11.16□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 WAPLQ7Z5K2 1190 aa11.16□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 TAB3Q8N5C8 712 aaPredicted RBP11.16□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 SUCOQ9UBS9 1254 aaKnown RBP11.16□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 PPT2Q9UMR5 302 aa11.16□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 JAG1P78504 1218 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 PAK2Q13177 524 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 AUHQ13825 339 aaKnown RBP11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 FBXO15Q8NCQ5 510 aaPredicted RBP11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 G6PC3Q9BUM1 346 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 DCP1AQ9NPI6 582 aaPredicted RBP11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 CHST7Q9NS84 486 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 ZMYM5Q9UJ78 669 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 FBXL21Q9UKT6 434 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 RAPGEF6Q8TEU7 1601 aa11.15□□□□□ -0.62
DNAAF4-CCPG1-202ENST00000568310 DBX1A6NMT0 343 aa11.14□□□□□ -0.63
DNAAF4-CCPG1-202ENST00000568310 SYPP08247 313 aa11.14□□□□□ -0.63
DNAAF4-CCPG1-202ENST00000568310 COL9A2Q14055 689 aaPredicted RBP11.14□□□□□ -0.63
DNAAF4-CCPG1-202ENST00000568310 SYDE1Q6ZW31 735 aaPredicted RBP11.14□□□□□ -0.63
DNAAF4-CCPG1-202ENST00000568310 PPP1R16BQ96T49 567 aa11.14□□□□□ -0.63
DNAAF4-CCPG1-202ENST00000568310 EPB41L4BQ9H329 900 aa11.14□□□□□ -0.63
DNAAF4-CCPG1-202ENST00000568310 SNX17Q15036 470 aa11.13□□□□□ -0.63
DNAAF4-CCPG1-202ENST00000568310 SPATA32Q96LK8 384 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms