RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CPVLQ9H3G5 476 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 HOXC10Q9NYD6 342 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 RBPJLQ9UBG7 517 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 CPA4Q9UI42 421 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 HPS5Q9UPZ3 1129 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 COL11A1P12107 1806 aaPredicted RBP21■□□□□ 0.95
COMMD4-222ENST00000568034 FOXN1O15353 648 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 GCLCP48506 637 aaPredicted RBP21■□□□□ 0.95
COMMD4-222ENST00000568034 NEK4P51957 841 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 RCAN1P53805 252 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 AK2P54819 239 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 PRPF38AQ8NAV1 312 aaKnown RBP21■□□□□ 0.95
COMMD4-222ENST00000568034 GTF3C2Q8WUA4 911 aaPredicted RBP21■□□□□ 0.95
COMMD4-222ENST00000568034 KIFC2Q96AC6 838 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 LARP6Q9BRS8 491 aaKnown RBP21■□□□□ 0.95
COMMD4-222ENST00000568034 BTBD7Q9P203 1132 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 MORF4L1Q9UBU8 362 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 PRR12Q9ULL5 1215 aa21■□□□□ 0.95
COMMD4-222ENST00000568034 ISY1Q9ULR0 285 aaKnown RBP21■□□□□ 0.95
COMMD4-222ENST00000568034 VWA5AO00534 786 aa20.99■□□□□ 0.95
COMMD4-222ENST00000568034 ZBTB43O43298 467 aa20.99■□□□□ 0.95
COMMD4-222ENST00000568034 RABEP1Q15276 862 aa20.99■□□□□ 0.95
COMMD4-222ENST00000568034 NOM1Q5C9Z4 860 aaKnown RBP20.99■□□□□ 0.95
COMMD4-222ENST00000568034 SYDE2Q5VT97 1194 aa20.99■□□□□ 0.95
COMMD4-222ENST00000568034 ANKRD13CQ8N6S4 541 aa20.99■□□□□ 0.95
COMMD4-222ENST00000568034 CHURC1Q8WUH1 139 aa20.99■□□□□ 0.95
COMMD4-222ENST00000568034 UBA5Q9GZZ9 404 aa20.99■□□□□ 0.95
COMMD4-222ENST00000568034 FAM217BQ9NTX9 383 aaPredicted RBP20.99■□□□□ 0.95
COMMD4-222ENST00000568034 GOLGA8BA8MQT2 603 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 GPR25O00155 361 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 CALM1P0DP23 149 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 CALM2P0DP24 149 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 CALM3P0DP25 149 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 HSPA8P11142 646 aaKnown RBP20.98■□□□□ 0.95
COMMD4-222ENST00000568034 FAM110CQ1W6H9 321 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 SAMD1Q6SPF0 538 aaPredicted RBP20.98■□□□□ 0.95
COMMD4-222ENST00000568034 NBPF11Q86T75 865 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 CCDC144CPQ8IYA2 1237 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 SLC38A10Q9HBR0 1119 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 ZNF214Q9UL59 606 aaPredicted RBP20.98■□□□□ 0.95
COMMD4-222ENST00000568034 RABGAP1Q9Y3P9 1069 aa20.98■□□□□ 0.95
COMMD4-222ENST00000568034 KLRF2D3W0D1 207 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 CYTH3O43739 400 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 PDIA3P30101 505 aaKnown RBP20.97■□□□□ 0.95
COMMD4-222ENST00000568034 CAP1Q01518 475 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 IKQ13123 557 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-222ENST00000568034 TMEM132BQ14DG7 1078 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 Q3C1V9 767 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 MB21D1Q8N884 522 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 FANCBQ8NB91 859 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 CTCFLQ8NI51 663 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-222ENST00000568034 PAGR1Q9BTK6 254 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 RANBP17Q9H2T7 1088 aaKnown RBP20.97■□□□□ 0.95
COMMD4-222ENST00000568034 TPCN1Q9ULQ1 816 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 ZNF536O15090 1300 aa20.97■□□□□ 0.95
COMMD4-222ENST00000568034 GOLGA8AA7E2F4 631 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 PLEKHA8P1O95397 391 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 CDC27P30260 824 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 SNAP25P60880 206 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 ERVK-9P63128 1117 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 ERVK-24P63145 666 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 SYNE3Q6ZMZ3 975 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 TMTC3Q6ZXV5 915 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 ZSWIM8A7E2V4 1837 aa20.96■□□□□ 0.95
COMMD4-222ENST00000568034 CTGFP29279 349 aa20.95■□□□□ 0.94
COMMD4-222ENST00000568034 KIF5BP33176 963 aa20.95■□□□□ 0.94
COMMD4-222ENST00000568034 METAP2P50579 478 aaKnown RBP eCLIP20.95■□□□□ 0.94
COMMD4-222ENST00000568034 ANKRD1Q15327 319 aa20.95■□□□□ 0.94
COMMD4-222ENST00000568034 RTN1Q16799 776 aa20.95■□□□□ 0.94
COMMD4-222ENST00000568034 ADGRF4Q8IZF3 695 aa20.95■□□□□ 0.94
COMMD4-222ENST00000568034 SRBD1Q8N5C6 995 aaKnown RBP20.95■□□□□ 0.94
COMMD4-222ENST00000568034 ZNF296Q8WUU4 475 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-222ENST00000568034 MTMR8Q96EF0 704 aa20.95■□□□□ 0.94
COMMD4-222ENST00000568034 ZNF274Q96GC6 653 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-222ENST00000568034 RIOX1Q9H6W3 641 aa20.95■□□□□ 0.94
COMMD4-222ENST00000568034 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
COMMD4-222ENST00000568034 ATP2A1O14983 1001 aa20.94■□□□□ 0.94
COMMD4-222ENST00000568034 LARGE1O95461 756 aa20.94■□□□□ 0.94
COMMD4-222ENST00000568034 FDX1P10109 184 aa20.94■□□□□ 0.94
COMMD4-222ENST00000568034 FUT2Q10981 343 aa20.94■□□□□ 0.94
COMMD4-222ENST00000568034 CMTR1Q8N1G2 835 aaKnown RBP20.94■□□□□ 0.94
COMMD4-222ENST00000568034 GPRC5AQ8NFJ5 357 aa20.94■□□□□ 0.94
COMMD4-222ENST00000568034 SPATC1LQ9H0A9 340 aa20.94■□□□□ 0.94
COMMD4-222ENST00000568034 JMJD4Q9H9V9 463 aa20.94■□□□□ 0.94
COMMD4-222ENST00000568034 RBM28Q9NW13 759 aaKnown RBP20.94■□□□□ 0.94
COMMD4-222ENST00000568034 NAP1L2Q9ULW6 460 aaPredicted RBP20.94■□□□□ 0.94
COMMD4-222ENST00000568034 ZBED4O75132 1171 aa20.93■□□□□ 0.94
COMMD4-222ENST00000568034 CD2BP2O95400 341 aaKnown RBP20.93■□□□□ 0.94
COMMD4-222ENST00000568034 TAL1P17542 331 aaPredicted RBP20.93■□□□□ 0.94
COMMD4-222ENST00000568034 ADD1P35611 737 aaKnown RBP20.93■□□□□ 0.94
COMMD4-222ENST00000568034 SP3Q02447 781 aa20.93■□□□□ 0.94
COMMD4-222ENST00000568034 NOL8Q76FK4 1167 aaKnown RBP20.93■□□□□ 0.94
COMMD4-222ENST00000568034 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
COMMD4-222ENST00000568034 MOV10L1Q9BXT6 1211 aaKnown RBP20.93■□□□□ 0.94
COMMD4-222ENST00000568034 PORCNQ9H237 461 aa20.93■□□□□ 0.94
COMMD4-222ENST00000568034 RAVER2Q9HCJ3 691 aaKnown RBP20.93■□□□□ 0.94
COMMD4-222ENST00000568034 SMARCA1P28370 1054 aa20.92■□□□□ 0.94
COMMD4-222ENST00000568034 CTCFP49711 727 aaPredicted RBP20.92■□□□□ 0.94
COMMD4-222ENST00000568034 GNAQP50148 359 aa20.92■□□□□ 0.94
COMMD4-222ENST00000568034 OAZ1P54368 228 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms