RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 NEK1Q96PY6 1258 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 MOV10L1Q9BXT6 1211 aaKnown RBP20.17■□□□□ 0.82
COMMD4-220ENST00000567720 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 SLC38A10Q9HBR0 1119 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 SRRDQ9UH36 339 aa20.17■□□□□ 0.82
COMMD4-220ENST00000567720 BAZ2BQ9UIF8 2168 aaKnown RBP20.17■□□□□ 0.82
COMMD4-220ENST00000567720 ERICH2A1L162 156 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 GNRH1P01148 92 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 ARHGEF6Q15052 776 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 FBXO46Q6PJ61 603 aaPredicted RBP20.16■□□□□ 0.82
COMMD4-220ENST00000567720 TCEANC2Q96MN5 208 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 MTA3Q9BTC8 594 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 GPCPD1Q9NPB8 672 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 PRR12Q9ULL5 1215 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 GABRQQ9UN88 632 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 PTPN22Q9Y2R2 807 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 PTCH2Q9Y6C5 1203 aa20.16■□□□□ 0.82
COMMD4-220ENST00000567720 SEC24BO95487 1268 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 GOLGA8HP0CJ92 632 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 MAPK4P31152 587 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 SLC16A2P36021 539 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 CCNA1P78396 465 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 PLS1Q14651 629 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 PKN2Q16513 984 aaKnown RBP20.15■□□□□ 0.82
COMMD4-220ENST00000567720 BTNL9Q6UXG8 535 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 GPR142Q7Z601 462 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 CHURC1Q8WUH1 139 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 TMEM87BQ96K49 555 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 JAKMIP1Q96N16 626 aaKnown RBP20.15■□□□□ 0.82
COMMD4-220ENST00000567720 WDR19Q8NEZ3 1342 aa20.15■□□□□ 0.82
COMMD4-220ENST00000567720 CPA1P15085 419 aa20.14■□□□□ 0.81
COMMD4-220ENST00000567720 ASPRV1Q53RT3 343 aa20.14■□□□□ 0.81
COMMD4-220ENST00000567720 GPATCH4Q5T3I0 446 aaKnown RBP20.14■□□□□ 0.81
COMMD4-220ENST00000567720 SYDE2Q5VT97 1194 aa20.14■□□□□ 0.81
COMMD4-220ENST00000567720 SHCBP1Q8NEM2 672 aa20.14■□□□□ 0.81
COMMD4-220ENST00000567720 CPVLQ9H3G5 476 aa20.14■□□□□ 0.81
COMMD4-220ENST00000567720 FRMPD3Q5JV73 1810 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 ZNF536O15090 1300 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 ATP2A1O14983 1001 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 ERCC3P19447 782 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 FLT3LGP49771 235 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 SNAP25P60880 206 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 EXOSC10Q01780 885 aaKnown RBP20.13■□□□□ 0.81
COMMD4-220ENST00000567720 TROAPQ12815 778 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 SNRNP48Q6IEG0 339 aaKnown RBP20.13■□□□□ 0.81
COMMD4-220ENST00000567720 RIOX2Q8IUF8 465 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 COA7Q96BR5 231 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 TEX13BQ9BXU2 312 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 RANBP17Q9H2T7 1088 aaKnown RBP20.13■□□□□ 0.81
COMMD4-220ENST00000567720 RAVER2Q9HCJ3 691 aaKnown RBP20.13■□□□□ 0.81
COMMD4-220ENST00000567720 LRRC37A2A6NM11 1700 aa20.13■□□□□ 0.81
COMMD4-220ENST00000567720 MCM3APO60318 1980 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 ZBED4O75132 1171 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 PARP1P09874 1014 aaKnown RBP20.12■□□□□ 0.81
COMMD4-220ENST00000567720 TAL1P17542 331 aaPredicted RBP20.12■□□□□ 0.81
COMMD4-220ENST00000567720 PRMT2P55345 433 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 GRM4Q14833 912 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 WDR78Q5VTH9 848 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 DHX32Q7L7V1 743 aaKnown RBP20.12■□□□□ 0.81
COMMD4-220ENST00000567720 PLEKHH3Q7Z736 793 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 ZNF654Q8IZM8 581 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 STAG2Q8N3U4 1231 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 MAD2L2Q9UI95 211 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 GJD2Q9UKL4 321 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 HPS5Q9UPZ3 1129 aa20.12■□□□□ 0.81
COMMD4-220ENST00000567720 HOXD10P28358 340 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 STAT3P40763 770 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 LIFRP42702 1097 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 OAZ1P54368 228 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 GRB14Q14449 540 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 MORN1Q5T089 497 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 NCAPG2Q86XI2 1143 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 CCAR1Q8IX12 1150 aaKnown RBP20.11■□□□□ 0.81
COMMD4-220ENST00000567720 CPXCR1Q8N123 301 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 SOCS4Q8WXH5 440 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 RIPK3Q9Y572 518 aa20.11■□□□□ 0.81
COMMD4-220ENST00000567720 DDAH1O94760 285 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 SLC25A27O95847 323 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 HMGB1P09429 215 aaKnown RBP20.1■□□□□ 0.81
COMMD4-220ENST00000567720 FDX1P10109 184 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 CASTP20810 708 aaKnown RBP20.1■□□□□ 0.81
COMMD4-220ENST00000567720 CCDC174Q6PII3 467 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 CATIPQ7Z7H3 387 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 SGMS1Q86VZ5 419 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 USP6NLQ92738 828 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 ABHD8Q96I13 439 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 UBA5Q9GZZ9 404 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 MROH8Q9H579 483 aa20.1■□□□□ 0.81
COMMD4-220ENST00000567720 CWC22Q9HCG8 908 aaKnown RBP20.1■□□□□ 0.81
COMMD4-220ENST00000567720 PALM3A6NDB9 673 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-220ENST00000567720 RPS6KB1P23443 525 aa20.09■□□□□ 0.81
COMMD4-220ENST00000567720 PTPREP23469 700 aa20.09■□□□□ 0.81
COMMD4-220ENST00000567720 IRF5Q13568 498 aa20.09■□□□□ 0.81
COMMD4-220ENST00000567720 SLC35G1Q2M3R5 365 aa20.09■□□□□ 0.81
COMMD4-220ENST00000567720 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
COMMD4-220ENST00000567720 RAB11FIP4Q86YS3 637 aa20.09■□□□□ 0.81
COMMD4-220ENST00000567720 RAET1EQ8TD07 263 aa20.09■□□□□ 0.81
COMMD4-220ENST00000567720 AGBL1Q96MI9 1066 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms