RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 CHST3Q7LGC8 479 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 CCAR1Q8IX12 1150 aaKnown RBP11.52□□□□□ -0.57
GGA2-210ENST00000567339 ZNF654Q8IZM8 581 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 SHCBP1Q8NEM2 672 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 CTCFLQ8NI51 663 aaPredicted RBP11.52□□□□□ -0.57
GGA2-210ENST00000567339 KIFC2Q96AC6 838 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 ATG4CQ96DT6 458 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 LZTS2Q9BRK4 669 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 PAGR1Q9BTK6 254 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 TEX13BQ9BXU2 312 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 SLC38A10Q9HBR0 1119 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 RBPJLQ9UBG7 517 aa11.52□□□□□ -0.57
GGA2-210ENST00000567339 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 RBM25P49756 843 aaKnown RBP11.51□□□□□ -0.57
GGA2-210ENST00000567339 TRAF1Q13077 416 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 GRM4Q14833 912 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 ANKRD1Q15327 319 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 SYDE2Q5VT97 1194 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
GGA2-210ENST00000567339 SOCS4Q8WXH5 440 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 SPATC1LQ9H0A9 340 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 MROH8Q9H579 483 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 TXNRD2Q9NNW7 524 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
GGA2-210ENST00000567339 CCDC196A0A1B0GTZ2 297 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 PALM3A6NDB9 673 aaPredicted RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 TNPO2O14787 897 aaKnown RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 CNMDO75829 334 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 SEC24BO95487 1268 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 PSMC4P43686 418 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 APOA5Q6Q788 366 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 RIOX2Q8IUF8 465 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 COA7Q96BR5 231 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 C22orf23Q9BZE7 217 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 MAF1Q9H063 256 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 ALDH8A1Q9H2A2 487 aaPredicted RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 GPCPD1Q9NPB8 672 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 RBM28Q9NW13 759 aaKnown RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 BTBD7Q9P203 1132 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 ZNF214Q9UL59 606 aaPredicted RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 FRMPD2Q68DX3 1309 aaPredicted RBP11.5□□□□□ -0.57
GGA2-210ENST00000567339 RLFQ13129 1914 aa11.5□□□□□ -0.57
GGA2-210ENST00000567339 KLRF2D3W0D1 207 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 ZBTB43O43298 467 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 STRNO43815 780 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 FMNL1O95466 1100 aaPredicted RBP11.49□□□□□ -0.57
GGA2-210ENST00000567339 STAT3P40763 770 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 EVCP57679 992 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 PLS1Q14651 629 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 Q6ZUG5 572 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 ABRAQ8N0Z2 381 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 CD99L2Q8TCZ2 262 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 NUP133Q8WUM0 1156 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 PDRG1Q9NUG6 133 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 NID2Q14112 1375 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 PARP14Q460N5 1801 aa11.49□□□□□ -0.57
GGA2-210ENST00000567339 KLF18A0A0U1RQI7 1052 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 ICAM1P05362 532 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 SNRNP48Q6IEG0 339 aaKnown RBP11.48□□□□□ -0.57
GGA2-210ENST00000567339 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 POTEEQ6S8J3 1075 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
GGA2-210ENST00000567339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
GGA2-210ENST00000567339 RASGRP2Q7LDG7 609 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 OTOP1Q7RTM1 612 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 PLEKHH3Q7Z736 793 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 MICU3Q86XE3 530 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 BRF1Q92994 677 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 TCEANC2Q96MN5 208 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 SPZ1Q9BXG8 430 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 MOV10L1Q9BXT6 1211 aaKnown RBP11.48□□□□□ -0.57
GGA2-210ENST00000567339 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
GGA2-210ENST00000567339 SENP2Q9HC62 589 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 GPHNQ9NQX3 736 aaPredicted RBP11.48□□□□□ -0.57
GGA2-210ENST00000567339 SRRDQ9UH36 339 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 TRIM17Q9Y577 477 aa11.48□□□□□ -0.57
GGA2-210ENST00000567339 GOLGA8BA8MQT2 603 aa11.47□□□□□ -0.57
GGA2-210ENST00000567339 DHX16O60231 1041 aaKnown RBP11.47□□□□□ -0.57
GGA2-210ENST00000567339 GOLGA8HP0CJ92 632 aa11.47□□□□□ -0.57
GGA2-210ENST00000567339 ERCC3P19447 782 aa11.47□□□□□ -0.57
GGA2-210ENST00000567339 SLC16A2P36021 539 aa11.47□□□□□ -0.57
GGA2-210ENST00000567339 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.57
GGA2-210ENST00000567339 IRF5Q13568 498 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms