RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SIGLEC6O43699 453 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 CDCP2Q5VXM1 449 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 OLFML2BQ68BL8 750 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 NKD1Q969G9 470 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 EHMT1Q9H9B1 1298 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 CRTAC1Q9NQ79 661 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 GFOD1Q9NXC2 390 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 ADAMTS1Q9UHI8 967 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 PCDHB12Q9Y5F1 795 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 NOTOA8MTQ0 251 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 PI3P19957 117 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 ARL4AP40617 200 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 LRRFIP1Q32MZ4 808 aaKnown RBP5.89□□□□□ -1.47
CDH1-211ENST00000567320 BBS9Q3SYG4 887 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 SLC6A18Q96N87 628 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 DSCC1Q9BVC3 393 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 ANTXR1Q9H6X2 564 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 GCM1Q9NP62 436 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 KCNQ5Q9NR82 932 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 GPR55Q9Y2T6 319 aaPredicted RBP5.89□□□□□ -1.47
CDH1-211ENST00000567320 ZNF281Q9Y2X9 895 aa5.89□□□□□ -1.47
CDH1-211ENST00000567320 A0A1W2PQ27 194 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 A0A1W2PQ64 194 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 A0A1W2PQC6 194 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 A0A1W2PQD8 194 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 EFEMP2O95967 443 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 MPOP05164 745 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 NME1P15531 152 aaKnown RBP5.88□□□□□ -1.47
CDH1-211ENST00000567320 PNLIPP16233 465 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 VIPR1P32241 457 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 CCNFP41002 786 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 SSPNQ14714 243 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 GALNT18Q6P9A2 607 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 TMEM151BQ8IW70 566 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 REXO1Q8N1G1 1221 aaKnown RBP5.88□□□□□ -1.47
CDH1-211ENST00000567320 FCRL2Q96LA5 508 aaPredicted RBP5.88□□□□□ -1.47
CDH1-211ENST00000567320 SIGLEC10Q96LC7 697 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 PLCD4Q9BRC7 762 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 PARD6AQ9NPB6 346 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 TNFRSF10DQ9UBN6 386 aa5.88□□□□□ -1.47
CDH1-211ENST00000567320 WTIPA6NIX2 430 aaPredicted RBP5.87□□□□□ -1.47
CDH1-211ENST00000567320 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 PRRG2O14669 202 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 PRKCAP17252 672 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 HOXA5P20719 270 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 ENDOUP21128 410 aaKnown RBP5.87□□□□□ -1.47
CDH1-211ENST00000567320 FBXW10Q5XX13 1052 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 TMEM192Q8IY95 271 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 CCDC144CPQ8IYA2 1237 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 NAT16Q8N8M0 369 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 TMEM87AQ8NBN3 555 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 SPON2Q9BUD6 331 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
CDH1-211ENST00000567320 MBD1Q9UIS9 605 aaPredicted RBP5.87□□□□□ -1.47
CDH1-211ENST00000567320 NCANO14594 1321 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 NUDT19A8MXV4 375 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 ABLIM1O14639 778 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 EPHB3P54753 998 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 CYP4F8P98187 520 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 AUHQ13825 339 aaKnown RBP5.86□□□□□ -1.47
CDH1-211ENST00000567320 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 RAB3GAP1Q15042 981 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 HSF5Q4G112 596 aaPredicted RBP5.86□□□□□ -1.47
CDH1-211ENST00000567320 CRTC3Q6UUV7 619 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 KIAA0825Q8IV33 1275 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 NUP43Q8NFH3 380 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 PANK1Q8TE04 598 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 DHRS1Q96LJ7 313 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 SLC9A7Q96T83 725 aa5.86□□□□□ -1.47
CDH1-211ENST00000567320 FADS2P1A8MWK0 482 aa5.85□□□□□ -1.47
CDH1-211ENST00000567320 LAPTM5Q13571 262 aa5.85□□□□□ -1.47
CDH1-211ENST00000567320 NOL9Q5SY16 702 aaKnown RBP5.85□□□□□ -1.47
CDH1-211ENST00000567320 CWF19L1Q69YN2 538 aaKnown RBP5.85□□□□□ -1.47
CDH1-211ENST00000567320 TMC6Q7Z403 805 aa5.85□□□□□ -1.47
CDH1-211ENST00000567320 RELTQ969Z4 430 aa5.85□□□□□ -1.47
CDH1-211ENST00000567320 NT5C1AQ9BXI3 368 aa5.85□□□□□ -1.47
CDH1-211ENST00000567320 AP5S1Q9NUS5 200 aa5.85□□□□□ -1.47
CDH1-211ENST00000567320 A0A1W2PQJ5 194 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 HRKO00198 91 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 N4BP3O15049 544 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 SASH1O94885 1247 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 GSTM1P09488 218 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 VAV1P15498 845 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 BMP8BP34820 402 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 BUD31P41223 144 aaPredicted RBP5.84□□□□□ -1.47
CDH1-211ENST00000567320 AFF3P51826 1226 aaKnown RBP5.84□□□□□ -1.47
CDH1-211ENST00000567320 TMEM62Q0P6H9 643 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 TDRD10Q5VZ19 366 aaKnown RBP5.84□□□□□ -1.47
CDH1-211ENST00000567320 JAMLQ86YT9 394 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 FERD3LQ96RJ6 166 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 CNTD2Q9H8S5 307 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 FAM86C1Q9NVL1 165 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 ERVK13-1Q9NX77 482 aa5.84□□□□□ -1.47
CDH1-211ENST00000567320 A0A1W2PQ45 241 aaPredicted RBP5.83□□□□□ -1.48
CDH1-211ENST00000567320 A0A1W2PQY0 241 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 TNFRSF10CO14798 259 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 ZNF205O95201 554 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 CTSKP43235 329 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 ERVFRD-1P60508 538 aa5.83□□□□□ -1.48
CDH1-211ENST00000567320 MRPL58Q14197 206 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms