RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 R3HDMLQ9H3Y0 253 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 LY9Q9HBG7 655 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 CYP46A1Q9Y6A2 500 aa14.22□□□□□ -0.13
SF3B3-208ENST00000567250 FRMPD2Q68DX3 1309 aaPredicted RBP14.21□□□□□ -0.13
SF3B3-208ENST00000567250 VWA5AO00534 786 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 GNRH1P01148 92 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 RPS6KB1P23443 525 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 KIF5BP33176 963 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 FCGRTP55899 365 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 EXOSC10Q01780 885 aaKnown RBP14.21□□□□□ -0.13
SF3B3-208ENST00000567250 RUFY3Q7L099 469 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 ZNF654Q8IZM8 581 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 CTCFLQ8NI51 663 aaPredicted RBP14.21□□□□□ -0.13
SF3B3-208ENST00000567250 KIFC2Q96AC6 838 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 CWC22Q9HCG8 908 aaKnown RBP14.21□□□□□ -0.13
SF3B3-208ENST00000567250 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 SLC12A7Q9Y666 1083 aa14.21□□□□□ -0.13
SF3B3-208ENST00000567250 ZBED4O75132 1171 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 SEC24BO95487 1268 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 MAPK4P31152 587 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 OAZ1P54368 228 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 BTNL9Q6UXG8 535 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 CD99L2Q8TCZ2 262 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 MAP3K14Q99558 947 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 ZSWIM6Q9HCJ5 1215 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 PNMA2Q9UL42 364 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 ADAMTS5Q9UNA0 930 aa14.2□□□□□ -0.14
SF3B3-208ENST00000567250 TNPO2O14787 897 aaKnown RBP14.19□□□□□ -0.14
SF3B3-208ENST00000567250 HOXD10P28358 340 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 RCAN1P53805 252 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 TROAPQ12815 778 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 PLS1Q14651 629 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 GRM4Q14833 912 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 SYDE2Q5VT97 1194 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 Q6ZUG5 572 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 FBXL16Q8N461 479 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 SHCBP1Q8NEM2 672 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 NUP133Q8WUM0 1156 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 COA7Q96BR5 231 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 CHMP4CQ96CF2 233 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 IL17RAQ96F46 866 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 TCEANC2Q96MN5 208 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 TEX13BQ9BXU2 312 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 LRRC2Q9BYS8 371 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 SPATC1LQ9H0A9 340 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 TXNRD2Q9NNW7 524 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 GPCPD1Q9NPB8 672 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
SF3B3-208ENST00000567250 ATP2A1O14983 1001 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 DHX16O60231 1041 aaKnown RBP14.18□□□□□ -0.14
SF3B3-208ENST00000567250 FMNL1O95466 1100 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-208ENST00000567250 SLC25A27O95847 323 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 PSMC4P43686 418 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 GNAQP50148 359 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 PRMT2P55345 433 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 CTU1Q7Z7A3 348 aaKnown RBP14.18□□□□□ -0.14
SF3B3-208ENST00000567250 C22orf23Q9BZE7 217 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 EFCC1Q9HA90 598 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 SLC38A10Q9HBR0 1119 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 SENP2Q9HC62 589 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 BTBD7Q9P203 1132 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 ZNF214Q9UL59 606 aaPredicted RBP14.18□□□□□ -0.14
SF3B3-208ENST00000567250 IVNS1ABPQ9Y6Y0 642 aa14.18□□□□□ -0.14
SF3B3-208ENST00000567250 KLF18A0A0U1RQI7 1052 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 CNMDO75829 334 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 GOLGA8HP0CJ92 632 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 TMEM132BQ14DG7 1078 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 WDR78Q5VTH9 848 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 SNRNP48Q6IEG0 339 aaKnown RBP14.17□□□□□ -0.14
SF3B3-208ENST00000567250 APOA5Q6Q788 366 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 MICU3Q86XE3 530 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 RIOX2Q8IUF8 465 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 SOCS4Q8WXH5 440 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 BRF1Q92994 677 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 LZTS2Q9BRK4 669 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 UPF3BQ9BZI7 483 aaKnown RBP14.17□□□□□ -0.14
SF3B3-208ENST00000567250 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
SF3B3-208ENST00000567250 MROH8Q9H579 483 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 RBM28Q9NW13 759 aaKnown RBP14.17□□□□□ -0.14
SF3B3-208ENST00000567250 MAD2L2Q9UI95 211 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 TRIM17Q9Y577 477 aa14.17□□□□□ -0.14
SF3B3-208ENST00000567250 PLXNA1Q9UIW2 1896 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 PALM3A6NDB9 673 aaPredicted RBP14.16□□□□□ -0.14
SF3B3-208ENST00000567250 GOLGA8BA8MQT2 603 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 KLRF2D3W0D1 207 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 ZBTB43O43298 467 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 CPA1P15085 419 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 SLC16A2P36021 539 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 STAT3P40763 770 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 RBM25P49756 843 aaKnown RBP14.16□□□□□ -0.14
SF3B3-208ENST00000567250 COL9A3Q14050 684 aaPredicted RBP14.16□□□□□ -0.14
SF3B3-208ENST00000567250 PPP2R5BQ15173 497 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 ANKRD1Q15327 319 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 PKN2Q16513 984 aaKnown RBP14.16□□□□□ -0.14
SF3B3-208ENST00000567250 TTBK2Q6IQ55 1244 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 CPXCR1Q8N123 301 aa14.16□□□□□ -0.14
SF3B3-208ENST00000567250 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms