RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 CWC22Q9HCG8 908 aaKnown RBP19.13■□□□□ 0.65
SCAMP2-208ENST00000566557 GPHNQ9NQX3 736 aaPredicted RBP19.13■□□□□ 0.65
SCAMP2-208ENST00000566557 FEM1BQ9UK73 627 aa19.13■□□□□ 0.65
SCAMP2-208ENST00000566557 PPP1R9AQ9ULJ8 1098 aa19.13■□□□□ 0.65
SCAMP2-208ENST00000566557 MYPNQ86TC9 1320 aa19.13■□□□□ 0.65
SCAMP2-208ENST00000566557 MGAMO43451 1857 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 CCDC69A6NI79 296 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 SH2B2O14492 632 aaPredicted RBP19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 HMGB1P09429 215 aaKnown RBP19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 CASTP20810 708 aaKnown RBP19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 PSMA5P28066 241 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 LACTBP83111 547 aaPredicted RBP19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 PLS1Q14651 629 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 FAM160B2Q86V87 743 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 CCAR1Q8IX12 1150 aaKnown RBP19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 GPRC5AQ8NFJ5 357 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 SENP2Q9HC62 589 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 TXNRD2Q9NNW7 524 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 RABGAP1Q9Y3P9 1069 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 PTCH2Q9Y6C5 1203 aa19.12■□□□□ 0.65
SCAMP2-208ENST00000566557 GOLGA8HP0CJ92 632 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 ERVK-9P63128 1117 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 ERVK-24P63145 666 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 WDR78Q5VTH9 848 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 DHX32Q7L7V1 743 aaKnown RBP19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 CATIPQ7Z7H3 387 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 PRPF38AQ8NAV1 312 aaKnown RBP19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 IGDCC4Q8TDY8 1250 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 CHURC1Q8WUH1 139 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 ARHGAP39Q9C0H5 1083 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 LY9Q9HBG7 655 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 BTBD7Q9P203 1132 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 RBPJLQ9UBG7 517 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 MORF4L1Q9UBU8 362 aa19.11■□□□□ 0.65
SCAMP2-208ENST00000566557 CNMDO75829 334 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 FMNL1O95466 1100 aaPredicted RBP19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 SLC16A2P36021 539 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 PSMC4P43686 418 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 ZNF543Q08ER8 600 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 LBX2Q6XYB7 198 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 MB21D1Q8N884 522 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 NUP133Q8WUM0 1156 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 MTA3Q9BTC8 594 aa19.1■□□□□ 0.65
SCAMP2-208ENST00000566557 WDR19Q8NEZ3 1342 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 VWA5AO00534 786 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 ZBED4O75132 1171 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 PARP1P09874 1014 aaKnown RBP19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 FCGRTP55899 365 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 CCNA1P78396 465 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 ASPRV1Q53RT3 343 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 GPATCH4Q5T3I0 446 aaKnown RBP19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 TTBK2Q6IQ55 1244 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 ZNF654Q8IZM8 581 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 DPF3Q92784 378 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 MYL10Q9BUA6 226 aa19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
SCAMP2-208ENST00000566557 COL6A3P12111 3177 aa19.08■□□□□ 0.65
SCAMP2-208ENST00000566557 TNPO2O14787 897 aaKnown RBP19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 DHX16O60231 1041 aaKnown RBP19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 SNHG28P0DPA3 235 aa19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 RPS6KB1P23443 525 aa19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 SYDE2Q5VT97 1194 aa19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 POTEEQ6S8J3 1075 aa19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 RAB11FIP4Q86YS3 637 aa19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 UPF3BQ9BZI7 483 aaKnown RBP19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 UPF2Q9HAU5 1272 aaKnown RBP19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 RBM27Q9P2N5 1060 aaKnown RBP19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 CYP46A1Q9Y6A2 500 aa19.08■□□□□ 0.64
SCAMP2-208ENST00000566557 SNAP25P60880 206 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 EXOSC10Q01780 885 aaKnown RBP19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 TMEM132BQ14DG7 1078 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 Q3C1V9 767 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 CCDC174Q6PII3 467 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 SYNE3Q6ZMZ3 975 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 Q6ZUG5 572 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 CPXCR1Q8N123 301 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 TMTC2Q8N394 836 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 SH3TC2Q8TF17 1288 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 TRIM47Q96LD4 638 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 SPATC1LQ9H0A9 340 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 PORCNQ9H237 461 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 CPVLQ9H3G5 476 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 PRR12Q9ULL5 1215 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 SLC12A7Q9Y666 1083 aa19.07■□□□□ 0.64
SCAMP2-208ENST00000566557 RBBP6Q7Z6E9 1792 aaKnown RBP19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 DDAH1O94760 285 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 RXRAP19793 462 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 CTGFP29279 349 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 LIFRP42702 1097 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 ANAPC15P60006 121 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 GRM4Q14833 912 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 RUFY3Q7L099 469 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 MICU3Q86XE3 530 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 NCAPG2Q86XI2 1143 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 CCDC144CPQ8IYA2 1237 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 CTCFLQ8NI51 663 aaPredicted RBP19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 MOV10L1Q9BXT6 1211 aaKnown RBP19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 UBA5Q9GZZ9 404 aa19.06■□□□□ 0.64
SCAMP2-208ENST00000566557 RAVER2Q9HCJ3 691 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms