RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
UBFD1-205ENST00000566136 C6orf15Q6UXA7 325 aaPredicted RBP12.41□□□□□ -0.42
UBFD1-205ENST00000566136 C1orf122Q6ZSJ8 110 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 KCNH5Q8NCM2 988 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 WDR66Q8TBY9 1149 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 HERPUD2Q9BSE4 406 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 ZMYM5Q9UJ78 669 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
UBFD1-205ENST00000566136 TMEM229AB2RXF0 380 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 PDGFAP04085 211 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 DGKGP49619 791 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 PPP2R5CQ13362 524 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 PLA2G4EQ3MJ16 856 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 COL26A1Q96A83 441 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 SYNDIG1LA6NDD5 238 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 MAP3K6O95382 1288 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 APBA3O96018 575 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 E2F5Q15329 346 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 ANKRD45Q5TZF3 282 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 BAP1Q92560 729 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
UBFD1-205ENST00000566136 NPHS2Q9NP85 383 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 SMYD2Q9NRG4 433 aa12.4□□□□□ -0.42
UBFD1-205ENST00000566136 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
UBFD1-205ENST00000566136 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
UBFD1-205ENST00000566136 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
UBFD1-205ENST00000566136 NBPF20Q3BBV1 942 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 SH3PXD2AQ5TCZ1 1133 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 CHD1LQ86WJ1 897 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 FBXO27Q8NI29 283 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 API5Q9BZZ5 524 aaKnown RBP12.39□□□□□ -0.43
UBFD1-205ENST00000566136 AAASQ9NRG9 546 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 LRRC4BQ9NT99 713 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 WDR17Q8IZU2 1322 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 NFAT5O94916 1531 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 CHL1O00533 1208 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 GFPT2O94808 682 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 SDSP20132 328 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 MAP3K10Q02779 954 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 IGF2-ASQ6U949 168 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 EGFL6Q8IUX8 553 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 CNTD1Q8N815 330 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 AP1M1Q9BXS5 423 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 ACTR10Q9NZ32 417 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 TMCC3Q9ULS5 477 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 FLT4P35916 1363 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 DISP2A7MBM2 1401 aa12.39□□□□□ -0.43
UBFD1-205ENST00000566136 DDAH1O94760 285 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 IL33O95760 270 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 BECN1Q14457 450 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 CHMP4CQ96CF2 233 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 CAMKK2Q96RR4 588 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 CEP72Q9P209 647 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 FLT3P36888 993 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 MMP14P50281 582 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
UBFD1-205ENST00000566136 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
UBFD1-205ENST00000566136 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
UBFD1-205ENST00000566136 PARP4Q9UKK3 1724 aaKnown RBP12.38□□□□□ -0.43
UBFD1-205ENST00000566136 FRAT2O75474 233 aaPredicted RBP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 TIPRLO75663 272 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 MICAL2O94851 1124 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 ECEL1O95672 775 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 IGFBP4P22692 258 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 SOX5P35711 763 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 PTPN21Q16825 1174 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 RUFY4Q6ZNE9 571 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 CDHR1Q96JP9 859 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 SAP30BPQ9UHR5 308 aaKnown RBP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 TLR3O15455 904 aaKnown RBP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 MBD4O95243 580 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 DDB1Q16531 1140 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 PROX2Q3B8N5 592 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 WWC2Q6AWC2 1192 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 BLOC1S3Q6QNY0 202 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 EPM2AIP1Q7L775 607 aaPredicted RBP12.37□□□□□ -0.43
UBFD1-205ENST00000566136 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 SERTAD1Q9UHV2 236 aa12.37□□□□□ -0.43
UBFD1-205ENST00000566136 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
UBFD1-205ENST00000566136 UBA7P41226 1012 aa12.36□□□□□ -0.43
UBFD1-205ENST00000566136 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
UBFD1-205ENST00000566136 KIAA1614Q5VZ46 1190 aa12.36□□□□□ -0.43
UBFD1-205ENST00000566136 ZNF449Q6P9G9 518 aa12.36□□□□□ -0.43
UBFD1-205ENST00000566136 PASD1Q8IV76 773 aa12.36□□□□□ -0.43
UBFD1-205ENST00000566136 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms