RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 HIP1O00291 1037 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CREB3O43889 395 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PENKP01210 267 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 SCTRP47872 440 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CFAP58Q5T655 872 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 TMEM132EQ6IEE7 984 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 RPGRQ92834 1020 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 PURBQ96QR8 312 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 CTDP1Q9Y5B0 961 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 PCDHA5Q9Y5H7 936 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 MROH7-TTC4A0A0A0MT08 1334 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ZMYM6O95789 1325 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 KIF3BO15066 747 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PEX14O75381 377 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ZNF202O95125 648 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 GSTA1P08263 222 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ERCC5P28715 1186 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 INHBCP55103 352 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 IQCKQ8N0W5 287 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 TSEN2Q8NCE0 465 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 KLHDC4Q8TBB5 520 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ANKRD24Q8TF21 1146 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CAVIN3Q969G5 261 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 RRP36Q96EU6 259 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 RMDN3Q96TC7 470 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 FERMT1Q9BQL6 677 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 YIPF3Q9GZM5 350 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 TPP2P29144 1249 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 UBASH3AP57075 661 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 P3H4Q92791 437 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PLCB1Q9NQ66 1216 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PCMTD2Q9NV79 361 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 NOP53Q9NZM5 478 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 GPR75-ASB3A0A0A6YYF3 556 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SEC24CP53992 1094 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 MCCD1P59942 119 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 PTPAQ15257 358 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 WDR75Q8IWA0 830 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 ARFGAP2Q8N6H7 521 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CUL5Q93034 780 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SLF1Q9BQI6 1058 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 FAM129AQ9BZQ8 928 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ANKIB1Q9P2G1 1089 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PHF8Q9UPP1 1060 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ASB3Q9Y575 518 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 RASSF10A6NK89 507 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CDC27P30260 824 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CUL4BQ13620 913 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 HAUS3Q68CZ6 603 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SLC30A9Q6PML9 568 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 OSCARQ8IYS5 282 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CTNNBL1Q8WYA6 563 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 ANKRD27Q96NW4 1050 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PLEKHG4BQ96PX9 1271 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SEC62Q99442 399 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 NAA15Q9BXJ9 866 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 PFDN4Q9NQP4 134 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 MRGBPQ9NV56 204 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 TMA7Q9Y2S6 64 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 F8W031 263 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 NDUFA8P51970 172 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 XRCC4Q13426 336 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 METTL16Q86W50 562 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 NCAPG2Q86XI2 1143 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CNTROBQ8N137 903 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 BICD1Q96G01 975 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 AGXT2Q9BYV1 514 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 MAF1Q9H063 256 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ADD3Q9UEY8 706 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 RFX7Q2KHR2 1363 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SERPINC1P01008 464 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 PAEPP09466 180 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CFAP100Q494V2 611 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 GSPT2Q8IYD1 628 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 FAM227BQ96M60 508 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.22□□□□□ -1.896e-7■■■■□ 19.3
CHD9-218ENST00000566029 A0A1B0GTH6 734 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TBC1D12O60347 775 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 RPLP2P05387 115 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 MYL1P05976 194 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 LSP1P33241 339 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 RBL2Q08999 1139 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 CLUL1Q15846 466 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 HSP90AA5PQ58FG0 334 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TRAPPC11Q7Z392 1133 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ARHGAP22Q7Z5H3 698 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 DAAM2Q86T65 1068 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 USP37Q86T82 979 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 NOP9Q86U38 636 aaKnown RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 ZNF713Q8N859 430 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 ASZ1Q8WWH4 475 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 USP44Q9H0E7 712 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 TAF1DQ9H5J8 278 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 SLC4A7Q9Y6M7 1214 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 AKR1B15C9JRZ8 316 aaPredicted RBP3.22□□□□□ -1.89
CHD9-218ENST00000566029 CDKL5O76039 1030 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 ALDH1B1P30837 517 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 SESN3P58005 492 aa3.22□□□□□ -1.89
CHD9-218ENST00000566029 RNASE9P60153 205 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms