RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 COG2Q14746 738 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 TTBK2Q6IQ55 1244 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 CYP4F22Q6NT55 531 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 BTNL9Q6UXG8 535 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 CATSPERGQ6ZRH7 1159 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 ANKRD23Q86SG2 305 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
CDH1-208ENST00000565810 FAM184AQ8NB25 1140 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 KIFC2Q96AC6 838 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 RRP36Q96EU6 259 aaKnown RBP9.03□□□□□ -0.96
CDH1-208ENST00000565810 INTS4Q96HW7 963 aaKnown RBP9.03□□□□□ -0.96
CDH1-208ENST00000565810 MS4A4AQ96JQ5 239 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 CAPNS2Q96L46 248 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 SLF1Q9BQI6 1058 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 SPZ1Q9BXG8 430 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 SLC26A6Q9BXS9 759 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 FAM217BQ9NTX9 383 aaPredicted RBP9.03□□□□□ -0.96
CDH1-208ENST00000565810 SEC63Q9UGP8 760 aaKnown RBP9.03□□□□□ -0.96
CDH1-208ENST00000565810 SMC3Q9UQE7 1217 aa9.03□□□□□ -0.96
CDH1-208ENST00000565810 TESPA1A2RU30 521 aaPredicted RBP9.02□□□□□ -0.97
CDH1-208ENST00000565810 FAM155AB1AL88 458 aaPredicted RBP9.02□□□□□ -0.97
CDH1-208ENST00000565810 BTBD19C9JJ37 291 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 SLC16A2P36021 539 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 TRAF1Q13077 416 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 TREML2Q5T2D2 321 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 RASGRP2Q7LDG7 609 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 HOMER1Q86YM7 354 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 ADGRF4Q8IZF3 695 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 CMTR1Q8N1G2 835 aaKnown RBP9.02□□□□□ -0.97
CDH1-208ENST00000565810 GTF3C2Q8WUA4 911 aaPredicted RBP9.02□□□□□ -0.97
CDH1-208ENST00000565810 BRI3BPQ8WY22 251 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 WASF1Q92558 559 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 RNF26Q9BY78 433 aaPredicted RBP9.02□□□□□ -0.97
CDH1-208ENST00000565810 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 ZCCHC17Q9NP64 241 aaKnown RBP9.02□□□□□ -0.97
CDH1-208ENST00000565810 PNMA2Q9UL42 364 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 PPP1R9AQ9ULJ8 1098 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 PRR12Q9ULL5 1215 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 SLC45A1Q9Y2W3 748 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
CDH1-208ENST00000565810 MYPNQ86TC9 1320 aa9.02□□□□□ -0.97
CDH1-208ENST00000565810 PTPDC1A2A3K4 754 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 PDHXO00330 501 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 ZBTB5O15062 677 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 PRPF3O43395 683 aaKnown RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 DEXIO95424 95 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 ALDH1A1P00352 501 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 HSPA6P17066 643 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 XBP1P17861 261 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 DSG3P32926 999 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 KIF23Q02241 960 aaPredicted RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 MOGSQ13724 837 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 NTRK3Q16288 839 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 GPAT2Q6NUI2 795 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 NBPF11Q86T75 865 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 NSUN7Q8NE18 718 aaKnown RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 SMCR8Q8TEV9 937 aaPredicted RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 PIBF1Q8WXW3 757 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 PHKBQ93100 1093 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 DDX11Q96FC9 970 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 PARK7Q99497 189 aaKnown RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 CPVLQ9H3G5 476 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 CWC22Q9HCG8 908 aaKnown RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 FBXO28Q9NVF7 368 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 ORC3Q9UBD5 711 aaPredicted RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 WDR33Q9C0J8 1336 aaKnown RBP9.01□□□□□ -0.97
CDH1-208ENST00000565810 STK36Q9NRP7 1315 aa9.01□□□□□ -0.97
CDH1-208ENST00000565810 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
CDH1-208ENST00000565810 CYTH3O43739 400 aa9□□□□□ -0.97
CDH1-208ENST00000565810 JAK2O60674 1132 aa9□□□□□ -0.97
CDH1-208ENST00000565810 PPFIA3O75145 1194 aa9□□□□□ -0.97
CDH1-208ENST00000565810 CTDNEP1O95476 244 aa9□□□□□ -0.97
CDH1-208ENST00000565810 MAP2K2P36507 400 aa9□□□□□ -0.97
CDH1-208ENST00000565810 TM4SF4P48230 202 aa9□□□□□ -0.97
CDH1-208ENST00000565810 FUT2Q10981 343 aa9□□□□□ -0.97
CDH1-208ENST00000565810 ST3GAL1Q11201 340 aa9□□□□□ -0.97
CDH1-208ENST00000565810 TRIM29Q14134 588 aa9□□□□□ -0.97
CDH1-208ENST00000565810 CDC37Q16543 378 aaPredicted RBP9□□□□□ -0.97
CDH1-208ENST00000565810 IFNL1Q8IU54 200 aa9□□□□□ -0.97
CDH1-208ENST00000565810 MB21D1Q8N884 522 aa9□□□□□ -0.97
CDH1-208ENST00000565810 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
CDH1-208ENST00000565810 SMARCC2Q8TAQ2 1214 aa9□□□□□ -0.97
CDH1-208ENST00000565810 CCDC12Q8WUD4 166 aaPredicted RBP9□□□□□ -0.97
CDH1-208ENST00000565810 ATG4CQ96DT6 458 aa9□□□□□ -0.97
CDH1-208ENST00000565810 IPO9Q96P70 1041 aaKnown RBP9□□□□□ -0.97
CDH1-208ENST00000565810 PIGSQ96S52 555 aa9□□□□□ -0.97
CDH1-208ENST00000565810 P2RX7Q99572 595 aaKnown RBP9□□□□□ -0.97
CDH1-208ENST00000565810 AMNQ9BXJ7 453 aa9□□□□□ -0.97
CDH1-208ENST00000565810 RANBP17Q9H2T7 1088 aaKnown RBP9□□□□□ -0.97
CDH1-208ENST00000565810 FOXD4L1Q9NU39 408 aa9□□□□□ -0.97
CDH1-208ENST00000565810 CNTNAP5Q8WYK1 1306 aa9□□□□□ -0.97
CDH1-208ENST00000565810 SPDYE16A6NNV3 312 aaPredicted RBP8.99□□□□□ -0.97
CDH1-208ENST00000565810 hCG_1984214I3L0E3 225 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 VWA5AO00534 786 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 AOC2O75106 756 aa8.99□□□□□ -0.97
CDH1-208ENST00000565810 SCG2P13521 617 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms