RNA–Protein interactions for RNA: ENST00000565243.2

RNPS1-213, Transcript of RNA binding protein with serine rich domain 1, human

TSL 2

Gene RNPS1, Length 3,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-213	ENST00000565243	FAM71B	Q8TC56	605 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	DNAJC7	Q99615	494 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	AGPAT5	Q9NUQ2	364 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	ANAPC4	Q9UJX5	808 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	PARP1	P09874	1014 aa	Known RBP	13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	TMTC3	Q6ZXV5	915 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	TTYH3	Q9C0H2	523 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	MYH10	P35580	1976 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	KLRC4	O43908	158 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	RPN1	P04843	607 aa	Known RBP	13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	CYP7A1	P22680	504 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	AARS	P49588	968 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	BRINP3	Q76B58	766 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	MB21D1	Q8N884	522 aa		13.57	□□□□□ -0.24
RNPS1-213	ENST00000565243	ZNF263	O14978	683 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	GTPBP6	O43824	516 aa	Predicted RBP	13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	ERLIN1	O75477	346 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	AKAP17A	Q02040	695 aa	Known RBP	13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	EZH2	Q15910	746 aa	Known RBP	13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	PLCD3	Q8N3E9	789 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	EHD4	Q9H223	541 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	MYO1A	Q9UBC5	1043 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	RTL9	Q8NET4	1388 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	MYH14	Q7Z406	1995 aa	Known RBP	13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	TYW1B	Q6NUM6	668 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	RASGRP4	Q8TDF6	673 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	MTA3	Q9BTC8	594 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	GNAT2	P19087	354 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	PIP4K2B	P78356	416 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	TUBB2A	Q13885	445 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	PAPD7	Q5XG87	772 aa	Known RBP	13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	ADSSL1	Q8N142	457 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	TMTC2	Q8N394	836 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	TUBB2B	Q9BVA1	445 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	NACAP1	Q9BZK3	213 aa		13.56	□□□□□ -0.24
RNPS1-213	ENST00000565243	BCL9	O00512	1426 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	STARD3NL	O95772	234 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	MRPS25	P82663	173 aa	Known RBP	13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	SLC35G1	Q2M3R5	365 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	IFIT1B	Q5T764	474 aa	Known RBP	13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	DZIP3	Q86Y13	1208 aa	Known RBP	13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	HDAC7	Q8WUI4	952 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	PDS5A	Q29RF7	1337 aa	Known RBP	13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	C2orf54	Q08AI8	447 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	ESR2	Q92731	530 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	TSPYL1	Q9H0U9	437 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	LRP2BP	Q9P2M1	347 aa		13.55	□□□□□ -0.24
RNPS1-213	ENST00000565243	EIF3CL	B5ME19	914 aa	Known RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	EIF3J	O75822	258 aa	Known RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	PLEK	P08567	350 aa	Predicted RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	GGCX	P38435	758 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	GYG1	P46976	350 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	RRP36	Q96EU6	259 aa	Known RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	PLIN2	Q99541	437 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	EIF3C	Q99613	913 aa	Known RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	DUSP9	Q99956	384 aa	Known RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	TMEM60	Q9H2L4	133 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	LGALS16	A8MUM7	142 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243		B4DLN1	442 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	CHRND	Q07001	517 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	FAM47A	Q5JRC9	791 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	CTR9	Q6PD62	1173 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	LEKR1	Q6ZMV7	388 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	GNL3L	Q9NVN8	582 aa	Known RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	DOT1L	Q8TEK3	1739 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	FGR	P09769	529 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	CYP27A1	Q02318	531 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	MEA1	Q16626	185 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	GPIHBP1	Q8IV16	184 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	RNF41	Q9H4P4	317 aa	Predicted RBP	13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	SMARCAL1	Q9NZC9	954 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	ABCF2	Q9UG63	623 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	CAPN11	Q9UMQ6	739 aa		13.54	□□□□□ -0.24
RNPS1-213	ENST00000565243	MAGEB6P1	A0A0J9YX57	407 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	CYP2D6	P10635	497 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	CCDC122	Q5T0U0	273 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	C3orf67	Q6ZVT6	689 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	PURB	Q96QR8	312 aa	Known RBP	13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	CWC15	Q9P013	229 aa	Known RBP	13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	TTI2	Q6NXR4	508 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	COG1	Q8WTW3	980 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	EHD2	Q9NZN4	543 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	SAR1B	Q9Y6B6	198 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	ZNF804B	A4D1E1	1349 aa		13.53	□□□□□ -0.24
RNPS1-213	ENST00000565243	TRIM14	Q14142	442 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	KRT26	Q7Z3Y9	468 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	OR8K1	Q8NGG5	319 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	JAKMIP2	Q96AA8	810 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	SELENOO	Q9BVL4	669 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	VIPAS39	Q9H9C1	493 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	MED4	Q9NPJ6	270 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243		M0R2N6	131 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	EPHB6	O15197	1021 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	TNNT3	P45378	269 aa	Predicted RBP	13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	MIIP	Q5JXC2	388 aa		13.52	□□□□□ -0.24
RNPS1-213	ENST00000565243	CERS3	Q8IU89	383 aa		13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms