RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 LINC00116Q8NCU8 138 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 KLHL25Q9H0H3 589 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 NOL6Q9H6R4 1146 aaKnown RBP6.7□□□□□ -1.34
PALB2-203ENST00000565038 PRR13Q9NZ81 148 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 SUSD2Q9UGT4 822 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 FHOD1Q9Y613 1164 aa6.7□□□□□ -1.34
PALB2-203ENST00000565038 ZGLP1P0C6A0 271 aa6.69□□□□□ -1.34
PALB2-203ENST00000565038 ATG4DQ86TL0 474 aaPredicted RBP6.69□□□□□ -1.34
PALB2-203ENST00000565038 FAM178BQ8IXR5 827 aa6.69□□□□□ -1.34
PALB2-203ENST00000565038 SYTL4Q96C24 671 aaPredicted RBP6.69□□□□□ -1.34
PALB2-203ENST00000565038 ZDHHC15Q96MV8 337 aa6.69□□□□□ -1.34
PALB2-203ENST00000565038 GBP3Q9H0R5 595 aa6.69□□□□□ -1.34
PALB2-203ENST00000565038 ST7Q9NRC1 585 aa6.69□□□□□ -1.34
PALB2-203ENST00000565038 WHRNQ9P202 907 aa6.69□□□□□ -1.34
PALB2-203ENST00000565038 PPP1R1BQ9UD71 204 aaPredicted RBP6.69□□□□□ -1.34
PALB2-203ENST00000565038 EBF1Q9UH73 591 aa6.69□□□□□ -1.34
PALB2-203ENST00000565038 R3HCC1Q9Y3T6 440 aaKnown RBP6.69□□□□□ -1.34
PALB2-203ENST00000565038 TMEM82A0PJX8 343 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 STK10O94804 968 aaKnown RBP6.68□□□□□ -1.34
PALB2-203ENST00000565038 PAPLNO95428 1278 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 GSNP06396 782 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 VAV1P15498 845 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 ITGB5P18084 799 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 ATP2B1P20020 1258 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 BMP8BP34820 402 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 TRHRP34981 398 aaPredicted RBP6.68□□□□□ -1.34
PALB2-203ENST00000565038 NCAPHQ15003 741 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 FXNQ16595 210 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 FYB2Q5VWT5 728 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 CWF19L1Q69YN2 538 aaKnown RBP6.68□□□□□ -1.34
PALB2-203ENST00000565038 CELF2-AS1Q8N7Q2 184 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 FLAD1Q8NFF5 587 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 CCDC120Q96HB5 630 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 APEX2Q9UBZ4 518 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 ZMYM5Q9UJ78 669 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 SUGT1Q9Y2Z0 365 aa6.68□□□□□ -1.34
PALB2-203ENST00000565038 ANKRD34BA5PLL1 514 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 BIN1O00499 593 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 PPM1BO75688 479 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 ZNF205O95201 554 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 GJB6O95452 261 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 GTF2F1P35269 517 aaKnown RBP eCLIP6.67□□□□□ -1.34
PALB2-203ENST00000565038 DHX38Q92620 1227 aaKnown RBP6.67□□□□□ -1.34
PALB2-203ENST00000565038 PPP1R14AQ96A00 147 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 CDADC1Q9BWV3 514 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 LGR4Q9BXB1 951 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 C19orf44Q9H6X5 657 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 ZNF281Q9Y2X9 895 aa6.67□□□□□ -1.34
PALB2-203ENST00000565038 A0A087WZG4 1122 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 KLF4O43474 513 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 VAMP4O75379 141 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 GSTM1P09488 218 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 AFMP43652 599 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 MRM1Q6IN84 353 aaKnown RBP6.66□□□□□ -1.34
PALB2-203ENST00000565038 APBA2Q99767 749 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 SLC12A9Q9BXP2 914 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 AP5S1Q9NUS5 200 aa6.66□□□□□ -1.34
PALB2-203ENST00000565038 DIS3Q9Y2L1 958 aaKnown RBP6.66□□□□□ -1.34
PALB2-203ENST00000565038 SF3B6Q9Y3B4 125 aaKnown RBP6.66□□□□□ -1.34
PALB2-203ENST00000565038 HPXP02790 462 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 CD3EP07766 207 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 RAC2P15153 192 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 JUNBP17275 347 aaPredicted RBP6.65□□□□□ -1.34
PALB2-203ENST00000565038 DPY19L1Q2PZI1 675 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 RTP2Q5QGT7 225 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.34
PALB2-203ENST00000565038 PDZD8Q8NEN9 1154 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 LINC01599Q8WXQ3 324 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 MYLIPQ8WY64 445 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 KIRREL1Q96J84 757 aa6.65□□□□□ -1.34
PALB2-203ENST00000565038 CGGBP1Q9UFW8 167 aaPredicted RBP6.65□□□□□ -1.34
PALB2-203ENST00000565038 CARMIL2Q6F5E8 1435 aa6.65□□□□□ -1.35
PALB2-203ENST00000565038 USP2O75604 605 aaPredicted RBP6.64□□□□□ -1.35
PALB2-203ENST00000565038 IFNGR1P15260 489 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 POU4F1Q01851 419 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 DUSP4Q13115 394 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 KCNMB1Q16558 191 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 TIGD5Q53EQ6 642 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 ZSWIM9Q86XI8 627 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 CKAP2LQ8IYA6 745 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 ARHGEF39Q8N4T4 335 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 ABHD4Q8TB40 342 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 FAM168AQ92567 244 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 MAP6Q96JE9 813 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 HHIPL1Q96JK4 782 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 FCRL3Q96P31 734 aaPredicted RBP6.64□□□□□ -1.35
PALB2-203ENST00000565038 MCMBPQ9BTE3 642 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 TRIM55Q9BYV6 548 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 SP110Q9HB58 689 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 AKT3Q9Y243 479 aa6.64□□□□□ -1.35
PALB2-203ENST00000565038 SUSD5O60279 629 aa6.63□□□□□ -1.35
PALB2-203ENST00000565038 NOP2P46087 812 aaKnown RBP6.63□□□□□ -1.35
PALB2-203ENST00000565038 GALK1P51570 392 aa6.63□□□□□ -1.35
PALB2-203ENST00000565038 RAB33AQ14088 237 aa6.63□□□□□ -1.35
PALB2-203ENST00000565038 DDR2Q16832 855 aa6.63□□□□□ -1.35
PALB2-203ENST00000565038 SV2CQ496J9 727 aa6.63□□□□□ -1.35
PALB2-203ENST00000565038 OXR1Q8N573 874 aa6.63□□□□□ -1.35
PALB2-203ENST00000565038 RCC1LQ96I51 464 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms