RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CUTAO60888 179 aa22.42■■□□□ 1.18
CLN6-205ENST00000564846 KLRC3Q07444 240 aa22.42■■□□□ 1.18
CLN6-205ENST00000564846 SNW1Q13573 536 aaKnown RBP22.42■■□□□ 1.18
CLN6-205ENST00000564846 MAP3K11Q16584 847 aa22.42■■□□□ 1.18
CLN6-205ENST00000564846 TBC1D10BQ4KMP7 808 aaPredicted RBP22.42■■□□□ 1.18
CLN6-205ENST00000564846 CDAN1Q8IWY9 1227 aa22.42■■□□□ 1.18
CLN6-205ENST00000564846 GMCL1Q96IK5 515 aa22.42■■□□□ 1.18
CLN6-205ENST00000564846 SYT17Q9BSW7 474 aa22.42■■□□□ 1.18
CLN6-205ENST00000564846 ARHGEF10LQ9HCE6 1279 aa22.42■■□□□ 1.18
CLN6-205ENST00000564846 FAM205CA6NFA0 338 aa22.41■■□□□ 1.18
CLN6-205ENST00000564846 KINO60870 393 aaKnown RBP22.41■■□□□ 1.18
CLN6-205ENST00000564846 XRCC6P12956 609 aaKnown RBP eCLIP22.41■■□□□ 1.18
CLN6-205ENST00000564846 GNA11P29992 359 aa22.41■■□□□ 1.18
CLN6-205ENST00000564846 ADGRF4Q8IZF3 695 aa22.41■■□□□ 1.18
CLN6-205ENST00000564846 KRI1Q8N9T8 703 aaKnown RBP22.41■■□□□ 1.18
CLN6-205ENST00000564846 JMJD4Q9H9V9 463 aa22.41■■□□□ 1.18
CLN6-205ENST00000564846 C6orf50Q9HD87 102 aa22.41■■□□□ 1.18
CLN6-205ENST00000564846 ZBTB21Q9ULJ3 1066 aa22.41■■□□□ 1.18
CLN6-205ENST00000564846 PNMA6FA0A0J9YX94 578 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 ESYT2A0FGR8 921 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 M0R2N6 131 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 CTAGE5O15320 804 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 CAMK4Q16566 473 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 TTBK2Q6IQ55 1244 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 PIK3AP1Q6ZUJ8 805 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 KCTD1Q719H9 257 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 FMR1NBQ8N0W7 255 aaPredicted RBP22.4■■□□□ 1.18
CLN6-205ENST00000564846 ATP2B1P20020 1258 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 RBM43Q6ZSC3 357 aaKnown RBP22.4■■□□□ 1.18
CLN6-205ENST00000564846 MIGA2Q7L4E1 593 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 MTMR8Q96EF0 704 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 HACL1Q9UJ83 578 aa22.4■■□□□ 1.18
CLN6-205ENST00000564846 A0A1B0GVL5 298 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 RAD21O60216 631 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 CAP2P40123 477 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 TTC38Q5R3I4 469 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 PPP1R18Q6NYC8 613 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 TEPSINQ96N21 525 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 GPRC5DQ9NZD1 345 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 PCDHA6Q9UN73 950 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 PCDHA8Q9Y5H6 950 aa22.39■■□□□ 1.17
CLN6-205ENST00000564846 SMCO2A6NFE2 343 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 NDUFB10O96000 172 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 PTPREP23469 700 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 NDUFA8P51970 172 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 RBSNQ9H1K0 784 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 TMX2Q9Y320 296 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 FAM237AA0A1B0GTK4 181 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 CCDC194A0A1B0GVG4 234 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 ZBTB5O15062 677 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 SLC16A2P36021 539 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 NOM1Q5C9Z4 860 aaKnown RBP22.38■■□□□ 1.17
CLN6-205ENST00000564846 ZNF579Q8NAF0 562 aaKnown RBP22.38■■□□□ 1.17
CLN6-205ENST00000564846 FUCA2Q9BTY2 467 aa22.38■■□□□ 1.17
CLN6-205ENST00000564846 FBXO2Q9UK22 296 aaPredicted RBP22.38■■□□□ 1.17
CLN6-205ENST00000564846 SRPRBQ9Y5M8 271 aaKnown RBP22.38■■□□□ 1.17
CLN6-205ENST00000564846 DICER1Q9UPY3 1922 aaKnown RBP22.38■■□□□ 1.17
CLN6-205ENST00000564846 A0A1W2PRG0 241 aa22.37■■□□□ 1.17
CLN6-205ENST00000564846 ASNSP08243 561 aa22.37■■□□□ 1.17
CLN6-205ENST00000564846 RESP18Q5W5W9 173 aa22.37■■□□□ 1.17
CLN6-205ENST00000564846 SHC4Q6S5L8 630 aa22.37■■□□□ 1.17
CLN6-205ENST00000564846 DEFB129Q9H1M3 183 aa22.37■■□□□ 1.17
CLN6-205ENST00000564846 USP17L10C9JJH3 530 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 ADAMTS3O15072 1205 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 CCDC192P0DO97 292 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 BMP3P12645 472 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 PFKFB1P16118 471 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 APOBEC3FQ8IUX4 373 aaKnown RBP22.36■■□□□ 1.17
CLN6-205ENST00000564846 SH2D4AQ9H788 454 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 GOPCQ9HD26 462 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 GINM1Q9NU53 330 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 HPSEQ9Y251 543 aa22.36■■□□□ 1.17
CLN6-205ENST00000564846 KRT25Q7Z3Z0 450 aa22.35■■□□□ 1.17
CLN6-205ENST00000564846 CLIC6Q96NY7 704 aa22.35■■□□□ 1.17
CLN6-205ENST00000564846 ASTN2O75129 1339 aaPredicted RBP22.35■■□□□ 1.17
CLN6-205ENST00000564846 RASGRP4Q8TDF6 673 aa22.35■■□□□ 1.17
CLN6-205ENST00000564846 FERMT2Q96AC1 680 aa22.35■■□□□ 1.17
CLN6-205ENST00000564846 SCAF8Q9UPN6 1271 aaKnown RBP22.35■■□□□ 1.17
CLN6-205ENST00000564846 PHF20L1A8MW92 1017 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 ZNF202O95125 648 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 ECE1P42892 770 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 ZNF174Q15697 407 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 CKAP2LQ8IYA6 745 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 ACER1Q8TDN7 264 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 COA7Q96BR5 231 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 HOOK2Q96ED9 719 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 TIGD1Q96MW7 591 aa22.34■■□□□ 1.17
CLN6-205ENST00000564846 WNT7AO00755 349 aa22.33■■□□□ 1.17
CLN6-205ENST00000564846 SYKP43405 635 aa22.33■■□□□ 1.17
CLN6-205ENST00000564846 ADCY7P51828 1080 aa22.33■■□□□ 1.17
CLN6-205ENST00000564846 ATP2C1P98194 919 aaPredicted RBP22.33■■□□□ 1.17
CLN6-205ENST00000564846 BTNL9Q6UXG8 535 aa22.33■■□□□ 1.17
CLN6-205ENST00000564846 REXO1Q8N1G1 1221 aaKnown RBP22.33■■□□□ 1.17
CLN6-205ENST00000564846 FAM13BQ9NYF5 915 aa22.33■■□□□ 1.17
CLN6-205ENST00000564846 SBF1O95248 1867 aa22.33■■□□□ 1.16
CLN6-205ENST00000564846 PPP1R11O60927 126 aaPredicted RBP22.33■■□□□ 1.16
CLN6-205ENST00000564846 ANGEL2Q5VTE6 544 aaKnown RBP22.33■■□□□ 1.16
CLN6-205ENST00000564846 TRPM4Q8TD43 1214 aa22.33■■□□□ 1.16
CLN6-205ENST00000564846 NUP88Q99567 741 aaPredicted RBP22.33■■□□□ 1.16
CLN6-205ENST00000564846 SDF4Q9BRK5 362 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms