RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 TRAPPC3LQ5T215 181 aa25.27■■□□□ 1.64
SPSB3-206ENST00000564709 GOLGA6L9A6NEM1 432 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 M0R2N6 131 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 RASA1P20936 1047 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 TXLNAP40222 546 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 GPSM2P81274 684 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 PAK1Q13153 545 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 FAM196AQ6ZSG2 479 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 RASSF8Q8NHQ8 419 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 NELFBQ8WX92 580 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 ANKS1AQ92625 1134 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 RTFDC1Q9BY42 306 aaPredicted RBP25.26■■□□□ 1.63
SPSB3-206ENST00000564709 IRX2Q9BZI1 471 aaPredicted RBP25.26■■□□□ 1.63
SPSB3-206ENST00000564709 VPS16Q9H269 839 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 BTDP43251 543 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 TMED8Q6PL24 325 aaPredicted RBP25.26■■□□□ 1.63
SPSB3-206ENST00000564709 TAB2Q9NYJ8 693 aa25.26■■□□□ 1.63
SPSB3-206ENST00000564709 STXBP3O00186 592 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 MFAP3LO75121 409 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 GYPCP04921 128 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 H2AFXP16104 143 aaPredicted RBP25.25■■□□□ 1.63
SPSB3-206ENST00000564709 FXR1P51114 621 aaKnown RBP eCLIP25.25■■□□□ 1.63
SPSB3-206ENST00000564709 LZTFL1Q9NQ48 299 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 DISC1Q9NRI5 854 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 IGSF3O75054 1194 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 ZNF658Q5TYW1 1059 aaPredicted RBP25.25■■□□□ 1.63
SPSB3-206ENST00000564709 UBXN4Q92575 508 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 PYM1Q9BRP8 204 aaKnown RBP25.25■■□□□ 1.63
SPSB3-206ENST00000564709 RWDD2AQ9UIY3 292 aa25.25■■□□□ 1.63
SPSB3-206ENST00000564709 LY75O60449 1722 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 DDX60LQ5H9U9 1706 aaKnown RBP25.24■■□□□ 1.63
SPSB3-206ENST00000564709 TADA3O75528 432 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 UFL1O94874 794 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 CCDC175P0C221 793 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 GNAQP50148 359 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 DMTNQ08495 405 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 DTHD1Q6ZMT9 781 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 KIFC2Q96AC6 838 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 N4BP3O15049 544 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 TOM1O60784 492 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 PRCPP42785 496 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 CLCN6P51797 869 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 PPP4CP60510 307 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 BARHL2Q9NY43 387 aa25.24■■□□□ 1.63
SPSB3-206ENST00000564709 SNED1Q8TER0 1413 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 NAALADL2Q58DX5 795 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 CCDC148Q8NFR7 591 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 RPGRQ92834 1020 aaKnown RBP25.23■■□□□ 1.63
SPSB3-206ENST00000564709 EPC1Q9H2F5 836 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 MYH1P12882 1939 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 PALM3A6NDB9 673 aaPredicted RBP25.23■■□□□ 1.63
SPSB3-206ENST00000564709 TRIM49BA6NDI0 452 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 PRR5LQ6MZQ0 368 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 LIMA1Q9UHB6 759 aaKnown RBP25.23■■□□□ 1.63
SPSB3-206ENST00000564709 USP21Q9UK80 565 aa25.23■■□□□ 1.63
SPSB3-206ENST00000564709 KCNJ18B7U540 433 aa25.22■■□□□ 1.63
SPSB3-206ENST00000564709 KLRF2D3W0D1 207 aa25.22■■□□□ 1.63
SPSB3-206ENST00000564709 COPB1P53618 953 aaKnown RBP25.22■■□□□ 1.63
SPSB3-206ENST00000564709 KCNJ12Q14500 433 aa25.22■■□□□ 1.63
SPSB3-206ENST00000564709 SRRTQ9BXP5 876 aaKnown RBP25.22■■□□□ 1.63
SPSB3-206ENST00000564709 TCP11L1Q9NUJ3 509 aa25.22■■□□□ 1.63
SPSB3-206ENST00000564709 RMND1Q9NWS8 449 aa25.22■■□□□ 1.63
SPSB3-206ENST00000564709 ADGRG1Q9Y653 693 aa25.22■■□□□ 1.63
SPSB3-206ENST00000564709 TEX11Q8IYF3 940 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 EYA3Q99504 573 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 CD209Q9NNX6 404 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 LDHCP07864 332 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 CDK8P49336 464 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 TCP11X2Q5H9J9 407 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 LRRC15Q8TF66 581 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 CCDC12Q8WUD4 166 aaPredicted RBP25.21■■□□□ 1.63
SPSB3-206ENST00000564709 THSD7AQ9UPZ6 1657 aa25.21■■□□□ 1.63
SPSB3-206ENST00000564709 RNF225M0QZC1 329 aaPredicted RBP25.2■■□□□ 1.63
SPSB3-206ENST00000564709 MAP3K9P80192 1104 aa25.2■■□□□ 1.63
SPSB3-206ENST00000564709 CCDC178Q5BJE1 867 aa25.2■■□□□ 1.63
SPSB3-206ENST00000564709 USP17L2Q6R6M4 530 aa25.2■■□□□ 1.63
SPSB3-206ENST00000564709 DAGLBQ8NCG7 672 aa25.2■■□□□ 1.63
SPSB3-206ENST00000564709 PRDM4Q9UKN5 801 aa25.2■■□□□ 1.63
SPSB3-206ENST00000564709 MRFAP1Q9Y605 127 aa25.2■■□□□ 1.63
SPSB3-206ENST00000564709 NAPAP54920 295 aa25.2■■□□□ 1.62
SPSB3-206ENST00000564709 KRT222Q8N1A0 295 aa25.2■■□□□ 1.62
SPSB3-206ENST00000564709 NAA15Q9BXJ9 866 aaKnown RBP25.2■■□□□ 1.62
SPSB3-206ENST00000564709 UBA7P41226 1012 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 PPP2R3AQ06190 1150 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 CNGA4Q8IV77 575 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 ITIH6Q6UXX5 1313 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 EFCAB8A8MWE9 144 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 ZBTB22O15209 634 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 PMS1P54277 932 aaKnown RBP25.19■■□□□ 1.62
SPSB3-206ENST00000564709 VAT1LQ9HCJ6 419 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 FLT1P17948 1338 aa25.19■■□□□ 1.62
SPSB3-206ENST00000564709 FNBP4Q8N3X1 1017 aaPredicted RBP25.18■■□□□ 1.62
SPSB3-206ENST00000564709 ACRBPQ8NEB7 543 aa25.18■■□□□ 1.62
SPSB3-206ENST00000564709 NUP88Q99567 741 aaPredicted RBP25.18■■□□□ 1.62
SPSB3-206ENST00000564709 LRRC4BQ9NT99 713 aa25.18■■□□□ 1.62
SPSB3-206ENST00000564709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.18■■□□□ 1.62
SPSB3-206ENST00000564709 LETM2Q2VYF4 491 aa25.18■■□□□ 1.62
SPSB3-206ENST00000564709 C16orf86Q6ZW13 317 aa25.18■■□□□ 1.62
SPSB3-206ENST00000564709 TPM1P09493 284 aa25.17■■□□□ 1.62
SPSB3-206ENST00000564709 PARP1P09874 1014 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms