RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GRPEL1Q9HAV7 217 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 GOPCQ9HD26 462 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 ZBTB21Q9ULJ3 1066 aa17.82■□□□□ 0.44
COMMD4-210ENST00000564587 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-210ENST00000564587 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 F5H6K3 240 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 CAP2P40123 477 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 KLRC3Q07444 240 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 TPRNQ4KMQ1 711 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 AXDND1Q5T1B0 1012 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-210ENST00000564587 DCAF15Q66K64 600 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 KRT25Q7Z3Z0 450 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 SIAH1Q8IUQ4 282 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 ZNF579Q8NAF0 562 aaKnown RBP17.81■□□□□ 0.44
COMMD4-210ENST00000564587 GPKOWQ92917 476 aaPredicted RBP eCLIP17.81■□□□□ 0.44
COMMD4-210ENST00000564587 MTMR8Q96EF0 704 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 UBA5Q9GZZ9 404 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 VAT1LQ9HCJ6 419 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 GPRC5DQ9NZD1 345 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 PPP2R3BQ9Y5P8 575 aa17.81■□□□□ 0.44
COMMD4-210ENST00000564587 SBF1O95248 1867 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 FAM237AA0A1B0GTK4 181 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 ZBTB5O15062 677 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 TTC38Q5R3I4 469 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 GAS2L3Q86XJ1 694 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 HOMER1Q86YM7 354 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 TEX2Q8IWB9 1127 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 ADGRF4Q8IZF3 695 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 ENGASEQ8NFI3 743 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 JMJD4Q9H9V9 463 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 HACL1Q9UJ83 578 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 TMX2Q9Y320 296 aa17.8■□□□□ 0.44
COMMD4-210ENST00000564587 SHTN1A0MZ66 631 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 SMCO2A6NFE2 343 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 NR1I2O75469 434 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 SLURP2P0DP57 97 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 BMP3P12645 472 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 PTPREP23469 700 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 ORC2Q13416 577 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-210ENST00000564587 TBC1D10BQ4KMP7 808 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-210ENST00000564587 BTNL9Q6UXG8 535 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 RBM43Q6ZSC3 357 aaKnown RBP17.79■□□□□ 0.44
COMMD4-210ENST00000564587 SAMD7Q7Z3H4 446 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 FERMT2Q96AC1 680 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 TIGD1Q96MW7 591 aa17.79■□□□□ 0.44
COMMD4-210ENST00000564587 SRPRBQ9Y5M8 271 aaKnown RBP17.79■□□□□ 0.44
COMMD4-210ENST00000564587 M0R2N6 131 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 NDUFB10O96000 172 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-210ENST00000564587 MARCKSP29966 332 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-210ENST00000564587 RRP1BQ14684 758 aaKnown RBP17.78■□□□□ 0.44
COMMD4-210ENST00000564587 MCTP2Q6DN12 878 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 PIK3AP1Q6ZUJ8 805 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 FAM13BQ9NYF5 915 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 PCDHB6Q9Y5E3 794 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
COMMD4-210ENST00000564587 CTNND1O60716 968 aaKnown RBP17.77■□□□□ 0.44
COMMD4-210ENST00000564587 PLA2G6O60733 806 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 CAVIN2O95810 425 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 LMOD1P29536 600 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-210ENST00000564587 SNW1Q13573 536 aaKnown RBP17.77■□□□□ 0.44
COMMD4-210ENST00000564587 RESP18Q5W5W9 173 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 TYW1BQ6NUM6 668 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 KCTD1Q719H9 257 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 RASGRP2Q7LDG7 609 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 FMR1NBQ8N0W7 255 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-210ENST00000564587 ANP32BQ92688 251 aaKnown RBP17.77■□□□□ 0.44
COMMD4-210ENST00000564587 DEFB129Q9H1M3 183 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 CPVLQ9H3G5 476 aa17.77■□□□□ 0.44
COMMD4-210ENST00000564587 PITPNM2Q9BZ72 1349 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 LAD1O00515 517 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 RAD21O60216 631 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 ADCY7P51828 1080 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 MRPL12P52815 198 aaKnown RBP17.76■□□□□ 0.43
COMMD4-210ENST00000564587 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.43
COMMD4-210ENST00000564587 ARL6IP4Q66PJ3 421 aaKnown RBP17.76■□□□□ 0.43
COMMD4-210ENST00000564587 TTBK2Q6IQ55 1244 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 MIGA2Q7L4E1 593 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 ELOA2Q8IYF1 753 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-210ENST00000564587 REXO1Q8N1G1 1221 aaKnown RBP17.76■□□□□ 0.43
COMMD4-210ENST00000564587 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 CCDC34Q96HJ3 373 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 ZNF341Q9BYN7 854 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 GOLPH3LQ9H4A5 285 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 VCPKMTQ9H867 229 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 FBXO2Q9UK22 296 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-210ENST00000564587 HPSEQ9Y251 543 aa17.76■□□□□ 0.43
COMMD4-210ENST00000564587 GOLGB1Q14789 3259 aaKnown RBP17.76■□□□□ 0.43
COMMD4-210ENST00000564587 A0A1B0GVL5 298 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 EGFRP00533 1210 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 ATP2B1P20020 1258 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 JAG1P78504 1218 aa17.75■□□□□ 0.43
COMMD4-210ENST00000564587 ATP2C1P98194 919 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-210ENST00000564587 EARS2Q5JPH6 523 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms