RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 GTPBP4Q9BZE4 634 aaKnown RBP6.9□□□□□ -1.3
CHD9-210ENST00000564582 ASCC2Q9H1I8 757 aaPredicted RBP6.9□□□□□ -1.3
CHD9-210ENST00000564582 PAK6Q9NQU5 681 aaPredicted RBP6.9□□□□□ -1.3
CHD9-210ENST00000564582 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 ST14Q9Y5Y6 855 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 PITPNM2Q9BZ72 1349 aa6.9□□□□□ -1.3
CHD9-210ENST00000564582 IBTKQ9P2D0 1353 aaPredicted RBP6.9□□□□□ -1.31
CHD9-210ENST00000564582 TCOF1Q13428 1488 aaKnown RBP6.9□□□□□ -1.31
CHD9-210ENST00000564582 DYNC1I1O14576 645 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 ADAMTS4O75173 837 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 OFD1O75665 1012 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 POLR2BP30876 1174 aaKnown RBP6.89□□□□□ -1.31
CHD9-210ENST00000564582 PLCL1Q15111 1095 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 CCDC81Q6ZN84 652 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 DTWD2Q8NBA8 298 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 Q96M66 194 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 MPHOSPH9Q99550 1183 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 RRAGDQ9NQL2 400 aaPredicted RBP6.89□□□□□ -1.31
CHD9-210ENST00000564582 SLC12A7Q9Y666 1083 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 CGNL1Q0VF96 1302 aa6.89□□□□□ -1.31
CHD9-210ENST00000564582 EHBP1L1Q8N3D4 1523 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 ANKRD30BQ9BXX2 1392 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 CD8BP10966 210 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 XRCC6P12956 609 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHD9-210ENST00000564582 GUCY2CP25092 1073 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 FAM193AP78312 1265 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 ZNF574Q6ZN55 896 aaPredicted RBP6.88□□□□□ -1.31
CHD9-210ENST00000564582 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 SPRED2Q7Z698 418 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 ZSCAN30Q86W11 494 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 LSRQ86X29 649 aaPredicted RBP6.88□□□□□ -1.31
CHD9-210ENST00000564582 PMFBP1Q8TBY8 1022 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 UBE2FQ969M7 185 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 SLC6A18Q96N87 628 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 SLC9A7Q96T83 725 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 SEMA3GQ9NS98 782 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 ZSWIM5Q9P217 1185 aa6.88□□□□□ -1.31
CHD9-210ENST00000564582 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
CHD9-210ENST00000564582 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
CHD9-210ENST00000564582 FUT4P22083 530 aa6.87□□□□□ -1.31
CHD9-210ENST00000564582 HMGN5P82970 282 aaKnown RBP6.87□□□□□ -1.31
CHD9-210ENST00000564582 CNGB1Q14028 1251 aaPredicted RBP6.87□□□□□ -1.31
CHD9-210ENST00000564582 CLEC16AQ2KHT3 1053 aa6.87□□□□□ -1.31
CHD9-210ENST00000564582 NBPF12Q5TAG4 269 aaPredicted RBP6.87□□□□□ -1.31
CHD9-210ENST00000564582 MKRN2Q9H000 416 aaKnown RBP6.87□□□□□ -1.31
CHD9-210ENST00000564582 GRPEL1Q9HAV7 217 aa6.87□□□□□ -1.31
CHD9-210ENST00000564582 LMCD1Q9NZU5 365 aa6.87□□□□□ -1.31
CHD9-210ENST00000564582 OAS3Q9Y6K5 1087 aaKnown RBP6.87□□□□□ -1.31
CHD9-210ENST00000564582 CAMSAP2Q08AD1 1489 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 UHRF1BP1Q6BDS2 1440 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 LETM1O95202 739 aaPredicted RBP6.86□□□□□ -1.31
CHD9-210ENST00000564582 SSBP05455 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHD9-210ENST00000564582 GIPRP48546 466 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 ARID5AQ03989 594 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 ZP2Q05996 745 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 CCDC184Q52MB2 194 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 NFXL1Q6ZNB6 911 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 ABI1Q8IZP0 508 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 C19orf47Q8N9M1 422 aaKnown RBP6.86□□□□□ -1.31
CHD9-210ENST00000564582 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
CHD9-210ENST00000564582 PI4K2BQ8TCG2 481 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 SMARCC1Q92922 1105 aaPredicted RBP6.86□□□□□ -1.31
CHD9-210ENST00000564582 PPP1R9BQ96SB3 815 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 ATP13A1Q9HD20 1204 aa6.86□□□□□ -1.31
CHD9-210ENST00000564582 SUPT6HQ7KZ85 1726 aaKnown RBP6.86□□□□□ -1.31
CHD9-210ENST00000564582 COL17A1Q9UMD9 1497 aaPredicted RBP6.85□□□□□ -1.31
CHD9-210ENST00000564582 FAM86C2PA6NEL3 165 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 TPP2P29144 1249 aaPredicted RBP6.85□□□□□ -1.31
CHD9-210ENST00000564582 CD96P40200 585 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 IRAK1P51617 712 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 ZC3H6P61129 1189 aaKnown RBP6.85□□□□□ -1.31
CHD9-210ENST00000564582 RBM10P98175 930 aaKnown RBP6.85□□□□□ -1.31
CHD9-210ENST00000564582 XP32Q5T750 250 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 SLC23A3Q6PIS1 610 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 TMEM192Q8IY95 271 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 VWCEQ96DN2 955 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 CCDC120Q96HB5 630 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.85□□□□□ -1.31
CHD9-210ENST00000564582 DUSP15Q9H1R2 295 aaPredicted RBP6.85□□□□□ -1.31
CHD9-210ENST00000564582 SUCOQ9UBS9 1254 aaKnown RBP6.85□□□□□ -1.31
CHD9-210ENST00000564582 HMGXB3Q12766 1538 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 GAPVD1Q14C86 1478 aa6.85□□□□□ -1.31
CHD9-210ENST00000564582 USP47Q96K76 1375 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 ZNF500O60304 480 aaPredicted RBP6.84□□□□□ -1.31
CHD9-210ENST00000564582 LRRN2O75325 713 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 ACRP10323 421 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 SRFP11831 508 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 PMS1P54277 932 aaKnown RBP6.84□□□□□ -1.31
CHD9-210ENST00000564582 NMIQ13287 307 aaPredicted RBP6.84□□□□□ -1.31
CHD9-210ENST00000564582 NBPF9Q3BBW0 867 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 TSPYL5Q86VY4 417 aaPredicted RBP6.84□□□□□ -1.31
CHD9-210ENST00000564582 WFDC3Q8IUB2 231 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 SLC43A3Q8NBI5 491 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 SYTL4Q96C24 671 aaPredicted RBP6.84□□□□□ -1.31
CHD9-210ENST00000564582 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
CHD9-210ENST00000564582 SHDQ96IW2 340 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms