RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 CCDC96Q2M329 555 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 TSGA10IPQ3SY00 556 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 SAMD1Q6SPF0 538 aaPredicted RBP21.43■■□□□ 1.02
PKD1-227ENST00000564313 CYB5R4Q7L1T6 521 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 MB21D2Q8IYB1 491 aaPredicted RBP21.43■■□□□ 1.02
PKD1-227ENST00000564313 PNMA1Q8ND90 353 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 SHCBP1Q8NEM2 672 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 SPATC1LQ9H0A9 340 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 CWC22Q9HCG8 908 aaKnown RBP21.43■■□□□ 1.02
PKD1-227ENST00000564313 CTDP1Q9Y5B0 961 aaPredicted RBP21.43■■□□□ 1.02
PKD1-227ENST00000564313 A0A0C4DFX4 3053 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 ZBED4O75132 1171 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 SLC25A27O95847 323 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 SNHG28P0DPA3 235 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 PDHBP11177 359 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 MCM5P33992 734 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 IKQ13123 557 aaPredicted RBP21.42■■□□□ 1.02
PKD1-227ENST00000564313 GPATCH4Q5T3I0 446 aaKnown RBP21.42■■□□□ 1.02
PKD1-227ENST00000564313 DOCK3Q8IZD9 2030 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 SOCS4Q8WXH5 440 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 TAF6LQ9Y6J9 622 aa21.42■■□□□ 1.02
PKD1-227ENST00000564313 COL11A1P12107 1806 aaPredicted RBP21.41■■□□□ 1.02
PKD1-227ENST00000564313 IFIT3O14879 490 aaKnown RBP21.41■■□□□ 1.02
PKD1-227ENST00000564313 ATP2A1O14983 1001 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 PRKCZQ05513 592 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 SEC23AQ15436 765 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 KCTD1Q719H9 257 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 RAET1EQ8TD07 263 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 KIFC2Q96AC6 838 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 MTMR7Q9Y216 660 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 IVNS1ABPQ9Y6Y0 642 aa21.41■■□□□ 1.02
PKD1-227ENST00000564313 HSPA4P34932 840 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 OAZ1P54368 228 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 IRF5Q13568 498 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 PLS1Q14651 629 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 TMEM132BQ14DG7 1078 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 WTAPQ15007 396 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 BTNL9Q6UXG8 535 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 GPR142Q7Z601 462 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 PLEKHH3Q7Z736 793 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 SH3TC2Q8TF17 1288 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 TMEM87BQ96K49 555 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 MOV10L1Q9BXT6 1211 aaKnown RBP21.4■■□□□ 1.02
PKD1-227ENST00000564313 PORCNQ9H237 461 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 MROH8Q9H579 483 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 SLC38A10Q9HBR0 1119 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 GABRQQ9UN88 632 aa21.4■■□□□ 1.02
PKD1-227ENST00000564313 HMGB1P09429 215 aaKnown RBP21.39■■□□□ 1.01
PKD1-227ENST00000564313 STAT3P40763 770 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 ZNF543Q08ER8 600 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 RIOX2Q8IUF8 465 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 TMTC2Q8N394 836 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 REPS2Q8NFH8 660 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 DPF3Q92784 378 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 KCNB2Q92953 911 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 NUDT12Q9BQG2 462 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 TEX13BQ9BXU2 312 aa21.39■■□□□ 1.01
PKD1-227ENST00000564313 WDR19Q8NEZ3 1342 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 STRNO43815 780 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 FLT3LGP49771 235 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 ANTXR2P58335 489 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 ASPRV1Q53RT3 343 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 TMEM67Q5HYA8 995 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 WDR78Q5VTH9 848 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 SLAIN1Q8ND83 568 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 NEK1Q96PY6 1258 aa21.38■■□□□ 1.01
PKD1-227ENST00000564313 ZNF214Q9UL59 606 aaPredicted RBP21.38■■□□□ 1.01
PKD1-227ENST00000564313 SLC15A5A6NIM6 579 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 PRC1O43663 620 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 ERCC3P19447 782 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 IGDCC4Q8TDY8 1250 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 PXYLP1Q8TE99 480 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 PRO3102Q9H379 93 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 GJD2Q9UKL4 321 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 PNMA2Q9UL42 364 aa21.37■■□□□ 1.01
PKD1-227ENST00000564313 ZNF236Q9UL36 1845 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 FRMPD2Q68DX3 1309 aaPredicted RBP21.36■■□□□ 1.01
PKD1-227ENST00000564313 PARP1P09874 1014 aaKnown RBP21.36■■□□□ 1.01
PKD1-227ENST00000564313 RGS2P41220 211 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 MORN1Q5T089 497 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 SYDE2Q5VT97 1194 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 RASGRP2Q7LDG7 609 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 CHST3Q7LGC8 479 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 NCAPG2Q86XI2 1143 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
PKD1-227ENST00000564313 RASEFQ8IZ41 740 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 ABRAQ8N0Z2 381 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 SHISA4Q96DD7 197 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 PRR12Q9ULL5 1215 aa21.36■■□□□ 1.01
PKD1-227ENST00000564313 PLXNB2O15031 1838 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 XRCC5P13010 732 aaKnown RBP21.35■■□□□ 1.01
PKD1-227ENST00000564313 PTPREP23469 700 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 GRK4P32298 578 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 LIFRP42702 1097 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 GRB14Q14449 540 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
PKD1-227ENST00000564313 CATIPQ7Z7H3 387 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 CHMP4CQ96CF2 233 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 USP26Q9BXU7 913 aa21.35■■□□□ 1.01
PKD1-227ENST00000564313 GPCPD1Q9NPB8 672 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms