RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 MAF1Q9H063 256 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 FBXO28Q9NVF7 368 aa19.5■□□□□ 0.71
RNF40-206ENST00000564260 CTDP1Q9Y5B0 961 aaPredicted RBP19.5■□□□□ 0.71
RNF40-206ENST00000564260 CCDC69A6NI79 296 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 STRNO43815 780 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 KIF5BP33176 963 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 GNAQP50148 359 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 IKQ13123 557 aaPredicted RBP19.49■□□□□ 0.71
RNF40-206ENST00000564260 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.49■□□□□ 0.71
RNF40-206ENST00000564260 OTOP1Q7RTM1 612 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 RIOX2Q8IUF8 465 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 ABRAQ8N0Z2 381 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 LZTS2Q9BRK4 669 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 PAGR1Q9BTK6 254 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 AGXT2Q9BYV1 514 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 ZSWIM6Q9HCJ5 1215 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 BTBD7Q9P203 1132 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 ZNF214Q9UL59 606 aaPredicted RBP19.49■□□□□ 0.71
RNF40-206ENST00000564260 RLFQ13129 1914 aa19.49■□□□□ 0.71
RNF40-206ENST00000564260 TNPO2O14787 897 aaKnown RBP19.48■□□□□ 0.71
RNF40-206ENST00000564260 FMNL1O95466 1100 aaPredicted RBP19.48■□□□□ 0.71
RNF40-206ENST00000564260 RPS6KB1P23443 525 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 SMARCA1P28370 1054 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 TMEM132BQ14DG7 1078 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 TKFCQ3LXA3 575 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 SYDE2Q5VT97 1194 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 POTEEQ6S8J3 1075 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 SYNE3Q6ZMZ3 975 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 KCTD1Q719H9 257 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 KIFC2Q96AC6 838 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 TRIM47Q96LD4 638 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 UPF2Q9HAU5 1272 aaKnown RBP19.48■□□□□ 0.71
RNF40-206ENST00000564260 SRRDQ9UH36 339 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 PRR12Q9ULL5 1215 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 CYP46A1Q9Y6A2 500 aa19.48■□□□□ 0.71
RNF40-206ENST00000564260 PALM3A6NDB9 673 aaPredicted RBP19.47■□□□□ 0.71
RNF40-206ENST00000564260 STAT3P40763 770 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 TRAF1Q13077 416 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 IRF5Q13568 498 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 GRM4Q14833 912 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 Q3C1V9 767 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 FBXO46Q6PJ61 603 aaPredicted RBP19.47■□□□□ 0.71
RNF40-206ENST00000564260 NFXL1Q6ZNB6 911 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 RUFY3Q7L099 469 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 CHST3Q7LGC8 479 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 ZNF654Q8IZM8 581 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 RANBP17Q9H2T7 1088 aaKnown RBP19.47■□□□□ 0.71
RNF40-206ENST00000564260 FBXO40Q9UH90 709 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 ISY1Q9ULR0 285 aaKnown RBP19.47■□□□□ 0.71
RNF40-206ENST00000564260 TRIM17Q9Y577 477 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
RNF40-206ENST00000564260 PARP14Q460N5 1801 aa19.46■□□□□ 0.71
RNF40-206ENST00000564260 CASTP20810 708 aaKnown RBP19.46■□□□□ 0.71
RNF40-206ENST00000564260 FGD1P98174 961 aa19.46■□□□□ 0.71
RNF40-206ENST00000564260 PLEKHH3Q7Z736 793 aa19.46■□□□□ 0.71
RNF40-206ENST00000564260 CTCFLQ8NI51 663 aaPredicted RBP19.46■□□□□ 0.71
RNF40-206ENST00000564260 MOV10L1Q9BXT6 1211 aaKnown RBP19.46■□□□□ 0.71
RNF40-206ENST00000564260 ALDH8A1Q9H2A2 487 aaPredicted RBP19.46■□□□□ 0.71
RNF40-206ENST00000564260 IVNS1ABPQ9Y6Y0 642 aa19.46■□□□□ 0.71
RNF40-206ENST00000564260 SLC15A5A6NIM6 579 aa19.45■□□□□ 0.7
RNF40-206ENST00000564260 XRCC5P13010 732 aaKnown RBP19.45■□□□□ 0.7
RNF40-206ENST00000564260 EVCP57679 992 aa19.45■□□□□ 0.7
RNF40-206ENST00000564260 GPR142Q7Z601 462 aa19.45■□□□□ 0.7
RNF40-206ENST00000564260 TRMT44Q8IYL2 757 aaKnown RBP19.45■□□□□ 0.7
RNF40-206ENST00000564260 CHST13Q8NET6 341 aa19.45■□□□□ 0.7
RNF40-206ENST00000564260 CWC22Q9HCG8 908 aaKnown RBP19.45■□□□□ 0.7
RNF40-206ENST00000564260 MAD2L2Q9UI95 211 aa19.45■□□□□ 0.7
RNF40-206ENST00000564260 PTPN22Q9Y2R2 807 aa19.45■□□□□ 0.7
RNF40-206ENST00000564260 ICAM1P05362 532 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 NUDT12Q9BQG2 462 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 ARHGAP39Q9C0H5 1083 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 PORCNQ9H237 461 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 GPCPD1Q9NPB8 672 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
RNF40-206ENST00000564260 SLC5A4Q9NY91 659 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 MTMR7Q9Y216 660 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 FRMPD2Q68DX3 1309 aaPredicted RBP19.44■□□□□ 0.7
RNF40-206ENST00000564260 NID2Q14112 1375 aa19.44■□□□□ 0.7
RNF40-206ENST00000564260 CCDC196A0A1B0GTZ2 297 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 KLRF2D3W0D1 207 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 ERCC3P19447 782 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 GRB14Q14449 540 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 PLS1Q14651 629 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 ANKRD1Q15327 319 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 SNRNP48Q6IEG0 339 aaKnown RBP19.43■□□□□ 0.7
RNF40-206ENST00000564260 APOA5Q6Q788 366 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 PXYLP1Q8TE99 480 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 SPZ1Q9BXG8 430 aa19.43■□□□□ 0.7
RNF40-206ENST00000564260 SEC24BO95487 1268 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 HOXC6P09630 235 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 PTPREP23469 700 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 CTGFP29279 349 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 RBM25P49756 843 aaKnown RBP19.42■□□□□ 0.7
RNF40-206ENST00000564260 MORN1Q5T089 497 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 TTBK2Q6IQ55 1244 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 FANCBQ8NB91 859 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 SLAIN1Q8ND83 568 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 MTMR8Q96EF0 704 aa19.42■□□□□ 0.7
RNF40-206ENST00000564260 RIOX1Q9H6W3 641 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms