RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 NOL8Q76FK4 1167 aaKnown RBP3.58□□□□□ -1.84
CHD9-209ENST00000564255 FAM214BQ7L5A3 538 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 FERMT3Q86UX7 667 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 AHI1Q8N157 1196 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 COX4I2Q96KJ9 171 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 SEMA6CQ9H3T2 930 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 SLC52A2Q9HAB3 445 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 MKL2Q9ULH7 1088 aa3.58□□□□□ -1.84
CHD9-209ENST00000564255 ALX3O95076 343 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 UVSSAQ2YD98 709 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 C22orf34Q6ZV56 151 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 STRA8Q7Z7C7 330 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 PPM1KQ8N3J5 372 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 PPP1R14AQ96A00 147 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 YIPF2Q9BWQ6 316 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 MTFR1LQ9H019 292 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 SUGT1Q9Y2Z0 365 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 CNTNAP4Q9C0A0 1308 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 RAB6AP20340 208 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 NOS3P29474 1203 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 DHCR24Q15392 516 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 SF1Q15637 639 aaKnown RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 CNNM4Q6P4Q7 775 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 SHISA2Q6UWI4 295 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 MAMDC2Q7Z304 686 aaPredicted RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 BRAPQ7Z569 592 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 KCTD13Q8WZ19 329 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 PTPRN2Q92932 1015 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 UBL7Q96S82 380 aaPredicted RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 ORAI3Q9BRQ5 295 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 CYP26B1Q9NR63 512 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 C1GALT1Q9NS00 363 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 FBXL21Q9UKT6 434 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 THRAP3Q9Y2W1 955 aaKnown RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 SF3B6Q9Y3B4 125 aaKnown RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 PHLDB1Q86UU1 1377 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 SIGLEC6O43699 453 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 LRRN2O75325 713 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 SGO2Q562F6 1265 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 TREML4Q6UXN2 200 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 FGD2Q7Z6J4 655 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 FIBCD1Q8N539 461 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 GFOD1Q9NXC2 390 aa3.57□□□□□ -1.84
CHD9-209ENST00000564255 NOP53Q9NZM5 478 aaKnown RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 TNPO3Q9Y5L0 923 aaKnown RBP3.57□□□□□ -1.84
CHD9-209ENST00000564255 BLACEA4D250 179 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 C9orf172C9J069 976 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 KCNH1O95259 989 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 CPP00450 1065 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 NFICP08651 508 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 IGFALSP35858 605 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 USP11P51784 963 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 ADGRE1Q14246 886 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 PCBP1Q15365 356 aaKnown RBP eCLIP3.56□□□□□ -1.849e-6■■■■■ 29.7
CHD9-209ENST00000564255 DDX46Q7L014 1031 aaKnown RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 TOP6BLQ8N6T0 577 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 UBR7Q8N806 425 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 TMEM145Q8NBT3 493 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 KREMEN2Q8NCW0 462 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 ADCY4Q8NFM4 1077 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 BRF1Q92994 677 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 SCLYQ96I15 445 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 NDOR1Q9UHB4 597 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 G3BP2Q9UN86 482 aaKnown RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 DYNC1LI2O43237 492 aaPredicted RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 SART1O43290 800 aaKnown RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 GAS2O43903 313 aaKnown RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 KCNA6P17658 529 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 CYP7A1P22680 504 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 SNW1Q13573 536 aaKnown RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 HSP90AB2PQ58FF8 381 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 ODR4Q5SWX8 454 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 ACBD5Q5T8D3 534 aaPredicted RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 STYK1Q6J9G0 422 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 NECAB2Q7Z6G3 386 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 ANKLE2Q86XL3 938 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 ARMC10Q8N2F6 343 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 SVOPQ8N4V2 548 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 WFDC12Q8WWY7 111 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 Q96M66 194 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 CEP89Q96ST8 783 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 NOL6Q9H6R4 1146 aaKnown RBP3.56□□□□□ -1.84
CHD9-209ENST00000564255 DAGLAQ9Y4D2 1042 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 ST14Q9Y5Y6 855 aa3.56□□□□□ -1.84
CHD9-209ENST00000564255 TCRBV16S1A1N1A0A5B0 115 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 VAMP4O75379 141 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 SNRPB2P08579 225 aaKnown RBP3.55□□□□□ -1.84
CHD9-209ENST00000564255 SPATA31C1P0DKV0 1188 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 KIR3DL1P43629 444 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 PPP2R5DQ14738 602 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 GRIK4Q16099 956 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 SEPT7Q16181 437 aaKnown RBP3.55□□□□□ -1.84
CHD9-209ENST00000564255 CT47A1Q5JQC4 288 aaPredicted RBP3.55□□□□□ -1.84
CHD9-209ENST00000564255 DENND5AQ6IQ26 1287 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 FAM20CQ8IXL6 584 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 DZIP1LQ8IYY4 767 aaKnown RBP3.55□□□□□ -1.84
CHD9-209ENST00000564255 NPLOC4Q8TAT6 608 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 FBLIM1Q8WUP2 373 aa3.55□□□□□ -1.84
CHD9-209ENST00000564255 DCAF4Q8WV16 495 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms