RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 KLRC3Q07444 240 aa22.9■■□□□ 1.26
SLX1A-204ENST00000563995 RCSD1Q6JBY9 416 aa22.9■■□□□ 1.26
SLX1A-204ENST00000563995 CATSPERGQ6ZRH7 1159 aa22.9■■□□□ 1.26
SLX1A-204ENST00000563995 MB21D2Q8IYB1 491 aaPredicted RBP22.9■■□□□ 1.26
SLX1A-204ENST00000563995 RASEFQ8IZ41 740 aa22.9■■□□□ 1.26
SLX1A-204ENST00000563995 USP26Q9BXU7 913 aa22.9■■□□□ 1.26
SLX1A-204ENST00000563995 TNKSO95271 1327 aa22.89■■□□□ 1.26
SLX1A-204ENST00000563995 RAD21O60216 631 aa22.89■■□□□ 1.25
SLX1A-204ENST00000563995 EIF5BO60841 1220 aaKnown RBP22.89■■□□□ 1.25
SLX1A-204ENST00000563995 NDUFB10O96000 172 aa22.89■■□□□ 1.25
SLX1A-204ENST00000563995 TOP1P11387 765 aaKnown RBP22.89■■□□□ 1.25
SLX1A-204ENST00000563995 ZKSCAN1P17029 563 aaPredicted RBP22.89■■□□□ 1.25
SLX1A-204ENST00000563995 DGKHQ86XP1 1220 aa22.89■■□□□ 1.25
SLX1A-204ENST00000563995 TRIB2Q92519 343 aa22.89■■□□□ 1.25
SLX1A-204ENST00000563995 TMEM47Q9BQJ4 181 aa22.89■■□□□ 1.25
SLX1A-204ENST00000563995 UBAC1Q9BSL1 405 aa22.89■■□□□ 1.25
SLX1A-204ENST00000563995 C8orf34Q49A92 452 aa22.88■■□□□ 1.25
SLX1A-204ENST00000563995 ANKS1AQ92625 1134 aa22.88■■□□□ 1.25
SLX1A-204ENST00000563995 HMX1Q9NP08 348 aaPredicted RBP22.88■■□□□ 1.25
SLX1A-204ENST00000563995 KRT32Q14532 448 aa22.87■■□□□ 1.25
SLX1A-204ENST00000563995 SLFN13Q68D06 897 aa22.87■■□□□ 1.25
SLX1A-204ENST00000563995 ENAHQ8N8S7 591 aaPredicted RBP22.87■■□□□ 1.25
SLX1A-204ENST00000563995 P2RX7Q99572 595 aaKnown RBP22.87■■□□□ 1.25
SLX1A-204ENST00000563995 TANGO6Q9C0B7 1094 aa22.87■■□□□ 1.25
SLX1A-204ENST00000563995 ANTXR2P58335 489 aa22.86■■□□□ 1.25
SLX1A-204ENST00000563995 FAM83BQ5T0W9 1011 aa22.86■■□□□ 1.25
SLX1A-204ENST00000563995 MAP3K21Q5TCX8 1036 aa22.86■■□□□ 1.25
SLX1A-204ENST00000563995 C7orf61Q8IZ16 206 aa22.86■■□□□ 1.25
SLX1A-204ENST00000563995 TXNRD2Q9NNW7 524 aa22.86■■□□□ 1.25
SLX1A-204ENST00000563995 OGDHLQ9ULD0 1010 aa22.86■■□□□ 1.25
SLX1A-204ENST00000563995 PEX10O60683 326 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 MCCP23508 829 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 MCM5P33992 734 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 HERVK_113P62684 666 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 SEC23AQ15436 765 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 GTF3C2Q8WUA4 911 aaPredicted RBP22.85■■□□□ 1.25
SLX1A-204ENST00000563995 GMCL1Q96IK5 515 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 NEK1Q96PY6 1258 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 NUP88Q99567 741 aaPredicted RBP22.85■■□□□ 1.25
SLX1A-204ENST00000563995 SNX14Q9Y5W7 946 aa22.85■■□□□ 1.25
SLX1A-204ENST00000563995 IFIT3O14879 490 aaKnown RBP22.84■■□□□ 1.25
SLX1A-204ENST00000563995 COL9A3Q14050 684 aaPredicted RBP22.84■■□□□ 1.25
SLX1A-204ENST00000563995 COG2Q14746 738 aa22.84■■□□□ 1.25
SLX1A-204ENST00000563995 SART3Q15020 963 aaKnown RBP22.84■■□□□ 1.25
SLX1A-204ENST00000563995 IFIT1BQ5T764 474 aaKnown RBP22.84■■□□□ 1.25
SLX1A-204ENST00000563995 CHST3Q7LGC8 479 aa22.84■■□□□ 1.25
SLX1A-204ENST00000563995 MTA3Q9BTC8 594 aa22.84■■□□□ 1.25
SLX1A-204ENST00000563995 KAT14Q9H8E8 782 aa22.84■■□□□ 1.25
SLX1A-204ENST00000563995 ZMYND8Q9ULU4 1186 aaPredicted RBP22.84■■□□□ 1.25
SLX1A-204ENST00000563995 ERICH2A1L162 156 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 SPDYE16A6NNV3 312 aaPredicted RBP22.83■■□□□ 1.25
SLX1A-204ENST00000563995 PRC1O43663 620 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 FLOT1O75955 427 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 SEC24BO95487 1268 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 BMP3P12645 472 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 CYP2B6P20813 491 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 SLC1A4P43007 532 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 LBX2Q6XYB7 198 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 TDHQ8IZJ6 230 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 SOCS4Q8WXH5 440 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 C11orf49Q9H6J7 331 aa22.83■■□□□ 1.25
SLX1A-204ENST00000563995 PFASO15067 1338 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 RLFQ13129 1914 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 XRCC5P13010 732 aaKnown RBP22.82■■□□□ 1.24
SLX1A-204ENST00000563995 PRKAR2AP13861 404 aaKnown RBP22.82■■□□□ 1.24
SLX1A-204ENST00000563995 DSG3P32926 999 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 RASGRP2Q7LDG7 609 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 PNMA1Q8ND90 353 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 IGDCC4Q8TDY8 1250 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 DCAF4Q8WV16 495 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 NUDT12Q9BQG2 462 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 HOXC10Q9NYD6 342 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 MTMR7Q9Y216 660 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 PARP14Q460N5 1801 aa22.82■■□□□ 1.24
SLX1A-204ENST00000563995 WTAPQ15007 396 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 TMEM67Q5HYA8 995 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 POTEEQ6S8J3 1075 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 GPRC5AQ8NFJ5 357 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 USP6NLQ92738 828 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 TMEM87BQ96K49 555 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 FBXO28Q9NVF7 368 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 RBPJLQ9UBG7 517 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 WDR19Q8NEZ3 1342 aa22.81■■□□□ 1.24
SLX1A-204ENST00000563995 A0A0G2JMZ2 1700 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 HMGB1P09429 215 aaKnown RBP22.8■■□□□ 1.24
SLX1A-204ENST00000563995 SNHG28P0DPA3 235 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 PDHBP11177 359 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 Q3C1V9 767 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 DHX32Q7L7V1 743 aaKnown RBP22.8■■□□□ 1.24
SLX1A-204ENST00000563995 CHMP4CQ96CF2 233 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 JAKMIP1Q96N16 626 aaKnown RBP22.8■■□□□ 1.24
SLX1A-204ENST00000563995 SLF1Q9BQI6 1058 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 FEM1BQ9UK73 627 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 PPP1R9AQ9ULJ8 1098 aa22.8■■□□□ 1.24
SLX1A-204ENST00000563995 SH2B2O14492 632 aaPredicted RBP22.79■■□□□ 1.24
SLX1A-204ENST00000563995 SYN1P17600 705 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 MAPK4P31152 587 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 ERVK-9P63128 1117 aa22.79■■□□□ 1.24
SLX1A-204ENST00000563995 ERVK-24P63145 666 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms