RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CYP7A1P22680 504 aa19.33■□□□□ 0.68
RNF40-205ENST00000563909 KRT40Q6A162 431 aa19.33■□□□□ 0.68
RNF40-205ENST00000563909 MIGA1Q8NAN2 632 aa19.33■□□□□ 0.68
RNF40-205ENST00000563909 MEIS3Q99687 375 aa19.33■□□□□ 0.68
RNF40-205ENST00000563909 CERS4Q9HA82 394 aa19.33■□□□□ 0.68
RNF40-205ENST00000563909 MYH1P12882 1939 aa19.33■□□□□ 0.68
RNF40-205ENST00000563909 PRR33A8MZF0 331 aa19.32■□□□□ 0.68
RNF40-205ENST00000563909 PLCD1P51178 756 aa19.32■□□□□ 0.68
RNF40-205ENST00000563909 TTC39AQ5SRH9 613 aa19.32■□□□□ 0.68
RNF40-205ENST00000563909 SPICE1Q8N0Z3 855 aa19.32■□□□□ 0.68
RNF40-205ENST00000563909 FRAT1Q92837 279 aaPredicted RBP19.32■□□□□ 0.68
RNF40-205ENST00000563909 HIPK3Q9H422 1215 aa19.32■□□□□ 0.68
RNF40-205ENST00000563909 CD320Q9NPF0 282 aa19.32■□□□□ 0.68
RNF40-205ENST00000563909 ZHX1Q9UKY1 873 aaPredicted RBP19.32■□□□□ 0.68
RNF40-205ENST00000563909 UMODL1Q5DID0 1318 aa19.31■□□□□ 0.68
RNF40-205ENST00000563909 CD4P01730 458 aa19.31■□□□□ 0.68
RNF40-205ENST00000563909 CST5P28325 142 aaPredicted RBP19.31■□□□□ 0.68
RNF40-205ENST00000563909 GNASQ5JWF2 1037 aa19.31■□□□□ 0.68
RNF40-205ENST00000563909 UIMC1Q96RL1 719 aa19.31■□□□□ 0.68
RNF40-205ENST00000563909 SPC25Q9HBM1 224 aa19.31■□□□□ 0.68
RNF40-205ENST00000563909 PIH1D3Q9NQM4 214 aaKnown RBP19.31■□□□□ 0.68
RNF40-205ENST00000563909 ZBBXA8MT70 800 aa19.3■□□□□ 0.68
RNF40-205ENST00000563909 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
RNF40-205ENST00000563909 ATP2A2P16615 1042 aaKnown RBP19.3■□□□□ 0.68
RNF40-205ENST00000563909 CCL23P55773 120 aa19.3■□□□□ 0.68
RNF40-205ENST00000563909 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
RNF40-205ENST00000563909 RIOX2Q8IUF8 465 aa19.3■□□□□ 0.68
RNF40-205ENST00000563909 CA3P07451 260 aa19.29■□□□□ 0.68
RNF40-205ENST00000563909 TMEM67Q5HYA8 995 aa19.29■□□□□ 0.68
RNF40-205ENST00000563909 CCDC158Q5M9N0 1113 aa19.29■□□□□ 0.68
RNF40-205ENST00000563909 CERS3Q8IU89 383 aa19.29■□□□□ 0.68
RNF40-205ENST00000563909 MSL3Q8N5Y2 521 aaKnown RBP19.29■□□□□ 0.68
RNF40-205ENST00000563909 EPOPA6NHQ4 379 aa19.28■□□□□ 0.68
RNF40-205ENST00000563909 POLR3DP05423 398 aaPredicted RBP19.28■□□□□ 0.68
RNF40-205ENST00000563909 STAT3P40763 770 aa19.28■□□□□ 0.68
RNF40-205ENST00000563909 ZAP70P43403 619 aa19.28■□□□□ 0.68
RNF40-205ENST00000563909 NHLH1Q02575 133 aa19.28■□□□□ 0.68
RNF40-205ENST00000563909 G3BP1Q13283 466 aaKnown RBP eCLIP19.28■□□□□ 0.68
RNF40-205ENST00000563909 RPUSD2Q8IZ73 545 aaKnown RBP19.28■□□□□ 0.68
RNF40-205ENST00000563909 ADAMTS5Q9UNA0 930 aa19.28■□□□□ 0.68
RNF40-205ENST00000563909 ADCY6O43306 1168 aa19.27■□□□□ 0.68
RNF40-205ENST00000563909 IGSF3O75054 1194 aa19.27■□□□□ 0.68
RNF40-205ENST00000563909 GNAI3P08754 354 aa19.27■□□□□ 0.68
RNF40-205ENST00000563909 GJA9P57773 515 aa19.27■□□□□ 0.68
RNF40-205ENST00000563909 MTX1Q13505 466 aa19.27■□□□□ 0.68
RNF40-205ENST00000563909 ARNTL2Q8WYA1 636 aa19.27■□□□□ 0.68
RNF40-205ENST00000563909 UPF3AQ9H1J1 476 aaKnown RBP19.27■□□□□ 0.68
RNF40-205ENST00000563909 IDH1O75874 414 aaKnown RBP19.26■□□□□ 0.67
RNF40-205ENST00000563909 TRIM27P14373 513 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 GABPAQ06546 454 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 ACVR2BQ13705 512 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 CCDC144BQ3MJ40 725 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 MAMDC4Q6UXC1 1216 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 SIAH1Q8IUQ4 282 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 DBNDD2Q9BQY9 259 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 NOC4LQ9BVI4 516 aaKnown RBP19.26■□□□□ 0.67
RNF40-205ENST00000563909 WNT8AQ9H1J5 351 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 ARHGEF10LQ9HCE6 1279 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 FBXO28Q9NVF7 368 aa19.26■□□□□ 0.67
RNF40-205ENST00000563909 MYO5AQ9Y4I1 1855 aaKnown RBP19.25■□□□□ 0.67
RNF40-205ENST00000563909 WDR46O15213 610 aaKnown RBP19.25■□□□□ 0.67
RNF40-205ENST00000563909 MS4A1P11836 297 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 EVX2Q03828 476 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 TMEM179Q6ZVK1 233 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 MAGEB6Q8N7X4 407 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 DDX11Q96FC9 970 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 TRPV6Q9H1D0 765 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 VCPKMTQ9H867 229 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 TMX2Q9Y320 296 aa19.25■□□□□ 0.67
RNF40-205ENST00000563909 VWA5AO00534 786 aa19.24■□□□□ 0.67
RNF40-205ENST00000563909 COPB2P35606 906 aa19.24■□□□□ 0.67
RNF40-205ENST00000563909 CSPP1Q1MSJ5 1256 aa19.24■□□□□ 0.67
RNF40-205ENST00000563909 SLC43A3Q8NBI5 491 aa19.24■□□□□ 0.67
RNF40-205ENST00000563909 VWCEQ96DN2 955 aa19.24■□□□□ 0.67
RNF40-205ENST00000563909 FBXL18Q96ME1 805 aa19.24■□□□□ 0.67
RNF40-205ENST00000563909 SH2D4AQ9H788 454 aa19.24■□□□□ 0.67
RNF40-205ENST00000563909 ZNF214Q9UL59 606 aaPredicted RBP19.24■□□□□ 0.67
RNF40-205ENST00000563909 CTAGE5O15320 804 aa19.23■□□□□ 0.67
RNF40-205ENST00000563909 BEX3Q00994 111 aa19.23■□□□□ 0.67
RNF40-205ENST00000563909 TTLL4Q14679 1199 aa19.23■□□□□ 0.67
RNF40-205ENST00000563909 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
RNF40-205ENST00000563909 FTSJ3Q8IY81 847 aaKnown RBP19.23■□□□□ 0.67
RNF40-205ENST00000563909 GJD3Q8N144 294 aa19.23■□□□□ 0.67
RNF40-205ENST00000563909 SCLYQ96I15 445 aa19.23■□□□□ 0.67
RNF40-205ENST00000563909 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.23■□□□□ 0.67
RNF40-205ENST00000563909 COL11A1P12107 1806 aaPredicted RBP19.23■□□□□ 0.67
RNF40-205ENST00000563909 ALADP13716 330 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 TAP1Q03518 808 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 ICA1Q05084 483 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 GRB10Q13322 594 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 ITGA7Q13683 1181 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
RNF40-205ENST00000563909 ABHD16BQ9H3Z7 469 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 MCM9Q9NXL9 1143 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
RNF40-205ENST00000563909 SSTR3P32745 418 aaPredicted RBP19.21■□□□□ 0.67
RNF40-205ENST00000563909 REPS2Q8NFH8 660 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms