RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 CATSPERGQ6ZRH7 1159 aa31.38■■■□□ 2.61
SH3GL3-205ENST00000563901 KIFC2Q96AC6 838 aa31.38■■■□□ 2.61
SH3GL3-205ENST00000563901 CCDC196A0A1B0GTZ2 297 aa31.38■■■□□ 2.61
SH3GL3-205ENST00000563901 FAM43AQ8N2R8 423 aa31.38■■■□□ 2.61
SH3GL3-205ENST00000563901 SPRYD3Q8NCJ5 442 aa31.38■■■□□ 2.61
SH3GL3-205ENST00000563901 MANSC4A6NHS7 340 aaPredicted RBP31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L15C9J2P7 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L13C9JLJ4 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L11C9JVI0 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L18D6R9N7 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L22D6RA61 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L17D6RBQ6 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L19D6RCP7 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L20D6RJB6 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 KIF23Q02241 960 aaPredicted RBP31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 USP17L24Q0WX57 530 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 CUL4AQ13619 759 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 PPP2R5BQ15173 497 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 ADGRF4Q8IZF3 695 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 NSUN7Q8NE18 718 aaKnown RBP31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 FEM1BQ9UK73 627 aa31.37■■■□□ 2.61
SH3GL3-205ENST00000563901 DHX16O60231 1041 aaKnown RBP31.36■■■□□ 2.61
SH3GL3-205ENST00000563901 GNAQP50148 359 aa31.36■■■□□ 2.61
SH3GL3-205ENST00000563901 SYDE2Q5VT97 1194 aa31.36■■■□□ 2.61
SH3GL3-205ENST00000563901 BTNL9Q6UXG8 535 aa31.36■■■□□ 2.61
SH3GL3-205ENST00000563901 SLF1Q9BQI6 1058 aa31.36■■■□□ 2.61
SH3GL3-205ENST00000563901 PRR12Q9ULL5 1215 aa31.36■■■□□ 2.61
SH3GL3-205ENST00000563901 TESPA1A2RU30 521 aaPredicted RBP31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 IGF2BP3O00425 579 aaKnown RBP eCLIP31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 HSPA6P17066 643 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 BECN1Q14457 450 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 JMJD4Q9H9V9 463 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 IFNAR1P17181 557 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 HOXA7P31268 230 aaPredicted RBP31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 VEGFBP49765 207 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 DDX11Q96FC9 970 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 SPZ1Q9BXG8 430 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 SLC26A6Q9BXS9 759 aa31.35■■■□□ 2.61
SH3GL3-205ENST00000563901 PTPDC1A2A3K4 754 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 PDHXO00330 501 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 FAM160B2Q86V87 743 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 HOMER1Q86YM7 354 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 CHURC1Q8WUH1 139 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 ATG4CQ96DT6 458 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 LZTS2Q9BRK4 669 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 ASCC2Q9H1I8 757 aaPredicted RBP31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 RIOX1Q9H6W3 641 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 PPP1R9AQ9ULJ8 1098 aa31.34■■■□□ 2.61
SH3GL3-205ENST00000563901 A0A0G2JMZ2 1700 aa31.33■■■□□ 2.61
SH3GL3-205ENST00000563901 WDR33Q9C0J8 1336 aaKnown RBP31.33■■■□□ 2.61
SH3GL3-205ENST00000563901 ANKRD23Q86SG2 305 aa31.33■■■□□ 2.61
SH3GL3-205ENST00000563901 PIGSQ96S52 555 aa31.33■■■□□ 2.61
SH3GL3-205ENST00000563901 SMCHD1A6NHR9 2005 aa31.33■■■□□ 2.61
SH3GL3-205ENST00000563901 PLA2G6O60733 806 aa31.32■■■□□ 2.6
SH3GL3-205ENST00000563901 CYP2C8P10632 490 aa31.32■■■□□ 2.6
SH3GL3-205ENST00000563901 IRX3P78415 501 aaPredicted RBP31.32■■■□□ 2.6
SH3GL3-205ENST00000563901 NOGQ13253 232 aa31.32■■■□□ 2.6
SH3GL3-205ENST00000563901 P2RX7Q99572 595 aaKnown RBP31.32■■■□□ 2.6
SH3GL3-205ENST00000563901 V9GY48 417 aaPredicted RBP31.32■■■□□ 2.6
SH3GL3-205ENST00000563901 SPDYE16A6NNV3 312 aaPredicted RBP31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 PEX10O60683 326 aa31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 COG2Q14746 738 aa31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 CPLX2Q6PUV4 134 aaKnown RBP31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 POTEEQ6S8J3 1075 aa31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 PRPF38AQ8NAV1 312 aaKnown RBP31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 TAL1P17542 331 aaPredicted RBP31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 DSG3P32926 999 aa31.31■■■□□ 2.6
SH3GL3-205ENST00000563901 FMNL1O95466 1100 aaPredicted RBP31.3■■■□□ 2.6
SH3GL3-205ENST00000563901 FDPSP14324 419 aaKnown RBP31.3■■■□□ 2.6
SH3GL3-205ENST00000563901 SSRP1Q08945 709 aaKnown RBP31.3■■■□□ 2.6
SH3GL3-205ENST00000563901 IFNL1Q8IU54 200 aa31.3■■■□□ 2.6
SH3GL3-205ENST00000563901 SMARCC2Q8TAQ2 1214 aa31.3■■■□□ 2.6
SH3GL3-205ENST00000563901 THSD7BQ9C0I4 1608 aa31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 CDKL5O76039 1030 aa31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 SREBF2Q12772 1141 aa31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 PABPC4Q13310 644 aaKnown RBP eCLIP31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 CDC37Q16543 378 aaPredicted RBP31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 CCDC174Q6PII3 467 aa31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 AIFM3Q96NN9 605 aa31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 LLPHQ9BRT6 129 aaKnown RBP31.29■■■□□ 2.6
SH3GL3-205ENST00000563901 OSBPP22059 807 aa31.28■■■□□ 2.6
SH3GL3-205ENST00000563901 SMARCA1P28370 1054 aa31.28■■■□□ 2.6
SH3GL3-205ENST00000563901 MTMR8Q96EF0 704 aa31.28■■■□□ 2.6
SH3GL3-205ENST00000563901 VWA5AO00534 786 aa31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 HSP90AA1P07900 732 aaKnown RBP31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 HERVK_113P62684 666 aa31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 QRICH1Q2TAL8 776 aa31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 RRP36Q96EU6 259 aaKnown RBP31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 RNF26Q9BY78 433 aaPredicted RBP31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 RANBP17Q9H2T7 1088 aaKnown RBP31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 ORC3Q9UBD5 711 aaPredicted RBP31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 PRPF3O43395 683 aaKnown RBP31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 PPP1R11O60927 126 aaPredicted RBP31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 TM4SF4P48230 202 aa31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 PKN1Q16512 942 aa31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 TRIM22Q8IYM9 498 aa31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 SLC45A1Q9Y2W3 748 aa31.27■■■□□ 2.6
SH3GL3-205ENST00000563901 FOSBP53539 338 aa31.26■■■□□ 2.59
SH3GL3-205ENST00000563901 INHBEP58166 350 aa31.26■■■□□ 2.59
SH3GL3-205ENST00000563901 HOXC10Q9NYD6 342 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms