RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TMEM232C9JQI7 657 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 PPP1R12BO60237 982 aaPredicted RBP25.26■■□□□ 1.63
LINC01960-201ENST00000563759 TMEM87AQ8NBN3 555 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 CCDC12Q8WUD4 166 aaPredicted RBP25.26■■□□□ 1.63
LINC01960-201ENST00000563759 CDCA5Q96FF9 252 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 CLEC11AQ9Y240 323 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 USP17L10C9JJH3 530 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 hCG_1984214I3L0E3 225 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 STXBP3O00186 592 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 CALML3P27482 149 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 NAPAP54920 295 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 KIAA1755Q5JYT7 1200 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 FAM83BQ5T0W9 1011 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 ATL3Q6DD88 541 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 ZNF713Q8N859 430 aaPredicted RBP25.26■■□□□ 1.63
LINC01960-201ENST00000563759 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.26■■□□□ 1.63
LINC01960-201ENST00000563759 SPATA32Q96LK8 384 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 AS3MTQ9HBK9 375 aa25.26■■□□□ 1.63
LINC01960-201ENST00000563759 STAT2P52630 851 aa25.25■■□□□ 1.63
LINC01960-201ENST00000563759 CEBPZQ03701 1054 aaKnown RBP25.25■■□□□ 1.63
LINC01960-201ENST00000563759 NR5A1Q13285 461 aa25.25■■□□□ 1.63
LINC01960-201ENST00000563759 OXER1Q8TDS5 423 aa25.25■■□□□ 1.63
LINC01960-201ENST00000563759 PNMA6FA0A0J9YX94 578 aa25.24■■□□□ 1.63
LINC01960-201ENST00000563759 USP2O75604 605 aaPredicted RBP25.24■■□□□ 1.63
LINC01960-201ENST00000563759 PTPRAP18433 802 aa25.24■■□□□ 1.63
LINC01960-201ENST00000563759 TYW1BQ6NUM6 668 aa25.24■■□□□ 1.63
LINC01960-201ENST00000563759 FAM177A1Q8N128 213 aaPredicted RBP25.24■■□□□ 1.63
LINC01960-201ENST00000563759 KIAA1683Q9H0B3 1180 aa25.24■■□□□ 1.63
LINC01960-201ENST00000563759 PTPRFP10586 1907 aa25.24■■□□□ 1.63
LINC01960-201ENST00000563759 ZBTB5O15062 677 aa25.23■■□□□ 1.63
LINC01960-201ENST00000563759 NOL9Q5SY16 702 aaKnown RBP25.23■■□□□ 1.63
LINC01960-201ENST00000563759 USP28Q96RU2 1077 aa25.23■■□□□ 1.63
LINC01960-201ENST00000563759 TRAK2O60296 914 aa25.23■■□□□ 1.63
LINC01960-201ENST00000563759 MTMR2Q13614 643 aa25.23■■□□□ 1.63
LINC01960-201ENST00000563759 NPY5RQ15761 445 aa25.23■■□□□ 1.63
LINC01960-201ENST00000563759 SYDE2Q5VT97 1194 aa25.23■■□□□ 1.63
LINC01960-201ENST00000563759 FTOQ9C0B1 505 aaKnown RBP eCLIP25.23■■□□□ 1.63
LINC01960-201ENST00000563759 CDC37Q16543 378 aaPredicted RBP25.22■■□□□ 1.63
LINC01960-201ENST00000563759 LPAR1Q92633 364 aa25.22■■□□□ 1.63
LINC01960-201ENST00000563759 MTMR8Q96EF0 704 aa25.22■■□□□ 1.63
LINC01960-201ENST00000563759 PARP14Q460N5 1801 aa25.22■■□□□ 1.63
LINC01960-201ENST00000563759 IREB2P48200 963 aaKnown RBP25.21■■□□□ 1.63
LINC01960-201ENST00000563759 SKOR2Q2VWA4 1001 aaPredicted RBP25.21■■□□□ 1.63
LINC01960-201ENST00000563759 ZNF280CQ8ND82 737 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 LEO1Q8WVC0 666 aaPredicted RBP25.21■■□□□ 1.63
LINC01960-201ENST00000563759 WDR18Q9BV38 432 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 PCDHA4Q9UN74 947 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 CSADQ9Y600 493 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 DDX49Q9Y6V7 483 aaKnown RBP25.21■■□□□ 1.63
LINC01960-201ENST00000563759 ELP1O95163 1332 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 POTEIP0CG38 1075 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 POTEJP0CG39 1038 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 USP14P54578 494 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 SPP2Q13103 211 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 VGLL4Q14135 290 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 GALNT17Q6IS24 598 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 BTNL9Q6UXG8 535 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 BLIDQ8IZY5 108 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 RRAGCQ9HB90 399 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 ZHX2Q9Y6X8 837 aa25.21■■□□□ 1.63
LINC01960-201ENST00000563759 MAP3K9P80192 1104 aa25.2■■□□□ 1.62
LINC01960-201ENST00000563759 TTLL12Q14166 644 aaPredicted RBP25.2■■□□□ 1.62
LINC01960-201ENST00000563759 QRICH1Q2TAL8 776 aa25.2■■□□□ 1.62
LINC01960-201ENST00000563759 COA7Q96BR5 231 aa25.2■■□□□ 1.62
LINC01960-201ENST00000563759 ANP32EQ9BTT0 268 aa25.2■■□□□ 1.62
LINC01960-201ENST00000563759 TRIM75PA6NK02 468 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 WDR46O15213 610 aaKnown RBP25.19■■□□□ 1.62
LINC01960-201ENST00000563759 CHURC1Q8WUH1 139 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 ZMYND12Q9H0C1 365 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 C6orf50Q9HD87 102 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 POLR3EQ9NVU0 708 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.19■■□□□ 1.62
LINC01960-201ENST00000563759 PRR12Q9ULL5 1215 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 GNA11P29992 359 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 RILPL1Q5EBL4 403 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 PPP1R18Q6NYC8 613 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.19■■□□□ 1.62
LINC01960-201ENST00000563759 DAGLBQ8NCG7 672 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 RTEL1Q9NZ71 1219 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 FEM1BQ9UK73 627 aa25.19■■□□□ 1.62
LINC01960-201ENST00000563759 SMCO2A6NFE2 343 aa25.18■■□□□ 1.62
LINC01960-201ENST00000563759 PPP1R11O60927 126 aaPredicted RBP25.18■■□□□ 1.62
LINC01960-201ENST00000563759 BACE1P56817 501 aa25.18■■□□□ 1.62
LINC01960-201ENST00000563759 TPRNQ4KMQ1 711 aa25.18■■□□□ 1.62
LINC01960-201ENST00000563759 MAP1SQ66K74 1059 aaPredicted RBP25.18■■□□□ 1.62
LINC01960-201ENST00000563759 FAM160B2Q86V87 743 aa25.18■■□□□ 1.62
LINC01960-201ENST00000563759 SNCAIPQ9Y6H5 919 aa25.18■■□□□ 1.62
LINC01960-201ENST00000563759 GADD45BO75293 160 aaPredicted RBP25.17■■□□□ 1.62
LINC01960-201ENST00000563759 UBE2HP62256 183 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 DGKZQ13574 1117 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 ANO1Q5XXA6 986 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 TNFRSF25Q93038 417 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 KIFC2Q96AC6 838 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 CLIC4Q9Y696 253 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 SMCHD1A6NHR9 2005 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 ESYT2A0FGR8 921 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 MBD3O95983 291 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 STK38Q15208 465 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 KLHL40Q2TBA0 621 aa25.17■■□□□ 1.62
LINC01960-201ENST00000563759 SAMD1Q6SPF0 538 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms