RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 ZNF213O14771 459 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 SLC25A27O95847 323 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 ADORA2AP29274 412 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 STAT3P40763 770 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 NT5C2P49902 561 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 PPP4R3BQ5MIZ7 849 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 STX8Q9UNK0 236 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 LRRC37A2A6NM11 1700 aa17.49■□□□□ 0.39
RPUSD1-204ENST00000563560 CYP21A2P08686 494 aa17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 MCCP23508 829 aa17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 BTNL9Q6UXG8 535 aa17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 TRPV1Q8NER1 839 aa17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 TTC14Q96N46 770 aa17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 RNF41Q9H4P4 317 aaPredicted RBP17.48■□□□□ 0.39
RPUSD1-204ENST00000563560 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 RAD21O60216 631 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 TOP1P11387 765 aaKnown RBP17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 RRP12Q5JTH9 1297 aaKnown RBP17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 OLFML2BQ68BL8 750 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 LHX8Q68G74 356 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 MAP4K1Q92918 833 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 TEX13BQ9BXU2 312 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 BIN2Q9UBW5 565 aaPredicted RBP17.47■□□□□ 0.39
RPUSD1-204ENST00000563560 B4E1Z4 1266 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 KDM4AO75164 1064 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 PDHBP11177 359 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 CCND3P30281 292 aaPredicted RBP17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 OAZ1P54368 228 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 PLS1Q14651 629 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 ZNF792Q3KQV3 632 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 STOX1Q6ZVD7 989 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 KCTD1Q719H9 257 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 NCAPG2Q86XI2 1143 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 DCAF4Q8WV16 495 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 FGD4Q96M96 766 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 CTNNA3Q9UI47 895 aa17.46■□□□□ 0.39
RPUSD1-204ENST00000563560 MYH6P13533 1939 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 CYBAP13498 195 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 CAPN2P17655 700 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 SLC1A4P43007 532 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 STAT2P52630 851 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 SEC23AQ15436 765 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 IMMTQ16891 758 aaKnown RBP17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 WDR78Q5VTH9 848 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 SNRNP48Q6IEG0 339 aaKnown RBP17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 DGKHQ86XP1 1220 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 ESR2Q92731 530 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 KIFC2Q96AC6 838 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 MAML3Q96JK9 1138 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 LSG1Q9H089 658 aaKnown RBP17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 PRR12Q9ULL5 1215 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 IVNS1ABPQ9Y6Y0 642 aa17.45■□□□□ 0.38
RPUSD1-204ENST00000563560 FDX1P10109 184 aa17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 COPB2P35606 906 aa17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 ESYT1Q9BSJ8 1104 aa17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 RANBP17Q9H2T7 1088 aaKnown RBP17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 RAVER2Q9HCJ3 691 aaKnown RBP17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 HMX1Q9NP08 348 aaPredicted RBP17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 TOMM22Q9NS69 142 aa17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
RPUSD1-204ENST00000563560 FCER1AP12319 257 aa17.43■□□□□ 0.38
RPUSD1-204ENST00000563560 CYP2C19P33261 490 aa17.43■□□□□ 0.38
RPUSD1-204ENST00000563560 ZNF543Q08ER8 600 aa17.43■□□□□ 0.38
RPUSD1-204ENST00000563560 CHURC1Q8WUH1 139 aa17.43■□□□□ 0.38
RPUSD1-204ENST00000563560 ZBED4O75132 1171 aa17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 PGK2P07205 417 aa17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 CPXCR1Q8N123 301 aa17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 DIS3LQ8TF46 1054 aaKnown RBP17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 CHMP4CQ96CF2 233 aa17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 AGBL1Q96MI9 1066 aa17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 MMP19Q99542 508 aa17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
RPUSD1-204ENST00000563560 COL6A1P12109 1028 aa17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 DPP9Q86TI2 863 aa17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 ANKLE1Q8NAG6 615 aa17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 KRT23Q9C075 422 aa17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 CNNM2Q9H8M5 875 aa17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 RBM8AQ9Y5S9 174 aaKnown RBP17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 ASTN1O14525 1302 aa17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 TNKSO95271 1327 aa17.41■□□□□ 0.38
RPUSD1-204ENST00000563560 E7EWF7 191 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 FARP2O94887 1054 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms