RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 GBP3Q9H0R5 595 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 CUEDC2Q9H467 287 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 THAP9Q9H5L6 903 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 MAGEF1Q9HAY2 307 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 DISC1Q9NRI5 854 aa14.75□□□□□ -0.05
USB1-207ENST00000563149 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 OAS2P29728 719 aaKnown RBP14.74□□□□□ -0.05
USB1-207ENST00000563149 KRT9P35527 623 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 PRCPP42785 496 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 FAM47AQ5JRC9 791 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 RCSD1Q6JBY9 416 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 ZNF662Q6ZS27 426 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 TXLNBQ8N3L3 684 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 CCDC148Q8NFR7 591 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 ACSBG1Q96GR2 724 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 CCSER1Q9C0I3 900 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 NYXQ9GZU5 481 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 TAB2Q9NYJ8 693 aa14.74□□□□□ -0.05
USB1-207ENST00000563149 AHDC1Q5TGY3 1603 aaPredicted RBP14.74□□□□□ -0.05
USB1-207ENST00000563149 M0R2N6 131 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 PARP1P09874 1014 aaKnown RBP14.73□□□□□ -0.05
USB1-207ENST00000563149 PRPHP41219 470 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 PPP1R2P41236 205 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 RPS8P62241 208 aaKnown RBP14.73□□□□□ -0.05
USB1-207ENST00000563149 GRM4Q14833 912 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 MARCH10Q8NA82 808 aaPredicted RBP14.73□□□□□ -0.05
USB1-207ENST00000563149 CELF1Q92879 486 aaKnown RBP14.73□□□□□ -0.05
USB1-207ENST00000563149 ANKZF1Q9H8Y5 726 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 TCP11L1Q9NUJ3 509 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 PSD3Q9NYI0 1048 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 CCDC194A0A1B0GVG4 234 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 CTAGE15A4D2H0 777 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 NMT2O60551 498 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 RHOBTB3O94955 611 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 CTAGE8P0CG41 777 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 ARHGAP25P42331 645 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 UBXN1Q04323 297 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 TSR1Q2NL82 804 aaKnown RBP14.73□□□□□ -0.05
USB1-207ENST00000563149 C3orf67Q6ZVT6 689 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 HDXQ7Z353 690 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 CTAGE6Q86UF2 777 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 CTAGE4Q8IX94 777 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 MB21D1Q8N884 522 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 ACRBPQ8NEB7 543 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 OR8K1Q8NGG5 319 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 LZTS2Q9BRK4 669 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 HAUS4Q9H6D7 363 aa14.73□□□□□ -0.05
USB1-207ENST00000563149 EPN1Q9Y6I3 576 aaPredicted RBP14.73□□□□□ -0.05
USB1-207ENST00000563149 NRAPQ86VF7 1730 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 ROBO3Q96MS0 1386 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 LGALS16A8MUM7 142 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 BEND6Q5SZJ8 279 aaPredicted RBP14.72□□□□□ -0.05
USB1-207ENST00000563149 C12orf60Q5U649 245 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 PNMA1Q8ND90 353 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 CCDC47Q96A33 483 aaKnown RBP14.72□□□□□ -0.05
USB1-207ENST00000563149 DHTKD1Q96HY7 919 aaPredicted RBP14.72□□□□□ -0.05
USB1-207ENST00000563149 NLRP3Q96P20 1036 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 PUF60Q9UHX1 559 aaKnown RBP14.72□□□□□ -0.05
USB1-207ENST00000563149 CAPN11Q9UMQ6 739 aa14.72□□□□□ -0.05
USB1-207ENST00000563149 A0A0G2JS52 829 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 WTIPA6NIX2 430 aaPredicted RBP14.71□□□□□ -0.05
USB1-207ENST00000563149 PSMA7O14818 248 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 POLR3GO15318 223 aaPredicted RBP14.71□□□□□ -0.05
USB1-207ENST00000563149 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.05
USB1-207ENST00000563149 NDUFA10O95299 355 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 DNM2P50570 870 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 TFAP4Q01664 338 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 IRF2BP1Q8IU81 584 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 RETREG2Q8NC44 543 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 ZNF507Q8TCN5 953 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 AK8Q96MA6 479 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 DNAJC7Q99615 494 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 KBTBD4Q9NVX7 518 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 MAGEC2Q9UBF1 373 aaPredicted RBP14.71□□□□□ -0.05
USB1-207ENST00000563149 MYO6Q9UM54 1294 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 GDAQ9Y2T3 454 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 LUC7L2Q9Y383 392 aaKnown RBP14.71□□□□□ -0.05
USB1-207ENST00000563149 MYH8P13535 1937 aa14.71□□□□□ -0.05
USB1-207ENST00000563149 A0A0U1RQJ8 604 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 KLRC4O43908 158 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 UBA7P41226 1012 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 KRT83P78385 493 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 AMPD2Q01433 879 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 NAALADL2Q58DX5 795 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 AMOTL1Q8IY63 956 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 GIMAP8Q8ND71 665 aaPredicted RBP14.7□□□□□ -0.06
USB1-207ENST00000563149 ATRIPQ8WXE1 791 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 EXOC4Q96A65 974 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 IQCDQ96DY2 449 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 MCM9Q9NXL9 1143 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 MKRN1Q9UHC7 482 aaKnown RBP14.7□□□□□ -0.06
USB1-207ENST00000563149 PCDHA6Q9UN73 950 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 L1RE1Q9UN81 338 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 PCDHA8Q9Y5H6 950 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 FAM205AQ6ZU69 1335 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 CNTNAP4Q9C0A0 1308 aa14.7□□□□□ -0.06
USB1-207ENST00000563149 RNF225M0QZC1 329 aaPredicted RBP14.7□□□□□ -0.06
USB1-207ENST00000563149 PSMD14O00487 310 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms