RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 P2RX7Q99572 595 aaKnown RBP21.92■■□□□ 1.1
RAB40C-207ENST00000563109 RBM28Q9NW13 759 aaKnown RBP21.92■■□□□ 1.1
RAB40C-207ENST00000563109 MAD2L2Q9UI95 211 aa21.92■■□□□ 1.1
RAB40C-207ENST00000563109 PALM3A6NDB9 673 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-207ENST00000563109 EVCP57679 992 aa21.91■■□□□ 1.1
RAB40C-207ENST00000563109 SYDE2Q5VT97 1194 aa21.91■■□□□ 1.1
RAB40C-207ENST00000563109 TTBK2Q6IQ55 1244 aa21.91■■□□□ 1.1
RAB40C-207ENST00000563109 NOL8Q76FK4 1167 aaKnown RBP21.91■■□□□ 1.1
RAB40C-207ENST00000563109 MB21D1Q8N884 522 aa21.91■■□□□ 1.1
RAB40C-207ENST00000563109 FANCBQ8NB91 859 aa21.91■■□□□ 1.1
RAB40C-207ENST00000563109 CFHR5Q9BXR6 569 aa21.91■■□□□ 1.1
RAB40C-207ENST00000563109 COL11A1P12107 1806 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-207ENST00000563109 NID2Q14112 1375 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 CCDC196A0A1B0GTZ2 297 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 KLRF2D3W0D1 207 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 DHX16O60231 1041 aaKnown RBP21.9■■□□□ 1.1
RAB40C-207ENST00000563109 TLR2O60603 784 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 FDX1P10109 184 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 SLC16A2P36021 539 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 PPP2R5BQ15173 497 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 BTNL9Q6UXG8 535 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 LBX2Q6XYB7 198 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 ATG4CQ96DT6 458 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 ZNF274Q96GC6 653 aaPredicted RBP21.9■■□□□ 1.1
RAB40C-207ENST00000563109 LZTS2Q9BRK4 669 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 WBP1LQ9NX94 342 aa21.9■■□□□ 1.1
RAB40C-207ENST00000563109 ADGRA2Q96PE1 1338 aa21.89■■□□□ 1.1
RAB40C-207ENST00000563109 ZBED4O75132 1171 aa21.89■■□□□ 1.09
RAB40C-207ENST00000563109 STAG2Q8N3U4 1231 aa21.89■■□□□ 1.09
RAB40C-207ENST00000563109 LARP6Q9BRS8 491 aaKnown RBP21.89■■□□□ 1.09
RAB40C-207ENST00000563109 PAGR1Q9BTK6 254 aa21.89■■□□□ 1.09
RAB40C-207ENST00000563109 PRR12Q9ULL5 1215 aa21.89■■□□□ 1.09
RAB40C-207ENST00000563109 TBC1D8O95759 1140 aa21.88■■□□□ 1.09
RAB40C-207ENST00000563109 PDIA3P30101 505 aaKnown RBP21.88■■□□□ 1.09
RAB40C-207ENST00000563109 UBA5Q9GZZ9 404 aa21.88■■□□□ 1.09
RAB40C-207ENST00000563109 CPA4Q9UI42 421 aa21.88■■□□□ 1.09
RAB40C-207ENST00000563109 RABGAP1Q9Y3P9 1069 aa21.88■■□□□ 1.09
RAB40C-207ENST00000563109 VWA5AO00534 786 aa21.87■■□□□ 1.09
RAB40C-207ENST00000563109 TMTC3Q6ZXV5 915 aa21.87■■□□□ 1.09
RAB40C-207ENST00000563109 ANKRD13CQ8N6S4 541 aa21.87■■□□□ 1.09
RAB40C-207ENST00000563109 SLKQ9H2G2 1235 aaPredicted RBP21.87■■□□□ 1.09
RAB40C-207ENST00000563109 TPCN1Q9ULQ1 816 aa21.87■■□□□ 1.09
RAB40C-207ENST00000563109 LIMCH1Q9UPQ0 1083 aa21.87■■□□□ 1.09
RAB40C-207ENST00000563109 HPS5Q9UPZ3 1129 aa21.87■■□□□ 1.09
RAB40C-207ENST00000563109 MYH6P13533 1939 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 MCM2P49736 904 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 STK3Q13188 491 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 FAM110CQ1W6H9 321 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 ADGRF4Q8IZF3 695 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 GPRC5AQ8NFJ5 357 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 CPVLQ9H3G5 476 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 SLC38A10Q9HBR0 1119 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 ADAMTS5Q9UNA0 930 aa21.86■■□□□ 1.09
RAB40C-207ENST00000563109 PLEKHA8P1O95397 391 aa21.85■■□□□ 1.09
RAB40C-207ENST00000563109 SMARCA1P28370 1054 aa21.85■■□□□ 1.09
RAB40C-207ENST00000563109 CCT2P78371 535 aaKnown RBP21.85■■□□□ 1.09
RAB40C-207ENST00000563109 PLS1Q14651 629 aa21.85■■□□□ 1.09
RAB40C-207ENST00000563109 CPLX2Q6PUV4 134 aaKnown RBP21.85■■□□□ 1.09
RAB40C-207ENST00000563109 C17orf99Q6UX52 265 aa21.85■■□□□ 1.09
RAB40C-207ENST00000563109 ZSCAN31Q96LW9 406 aaPredicted RBP21.85■■□□□ 1.09
RAB40C-207ENST00000563109 SPZ1Q9BXG8 430 aa21.85■■□□□ 1.09
RAB40C-207ENST00000563109 RANBP17Q9H2T7 1088 aaKnown RBP21.85■■□□□ 1.09
RAB40C-207ENST00000563109 MORF4L1Q9UBU8 362 aa21.85■■□□□ 1.09
RAB40C-207ENST00000563109 CPLX1O14810 134 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 BCRP11274 1271 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 OAZ1P54368 228 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 ERVK-9P63128 1117 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 ERVK-24P63145 666 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 CCNA1P78396 465 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 CDC37Q16543 378 aaPredicted RBP21.84■■□□□ 1.09
RAB40C-207ENST00000563109 CCDC174Q6PII3 467 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 VAT1LQ9HCJ6 419 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 BTBD7Q9P203 1132 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 RBPJLQ9UBG7 517 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 PNMA2Q9UL42 364 aa21.84■■□□□ 1.09
RAB40C-207ENST00000563109 PFKFB2O60825 505 aa21.83■■□□□ 1.09
RAB40C-207ENST00000563109 CDC27P30260 824 aa21.83■■□□□ 1.09
RAB40C-207ENST00000563109 TMEM132BQ14DG7 1078 aa21.83■■□□□ 1.09
RAB40C-207ENST00000563109 CCAR1Q8IX12 1150 aaKnown RBP21.83■■□□□ 1.09
RAB40C-207ENST00000563109 SRBD1Q8N5C6 995 aaKnown RBP21.83■■□□□ 1.09
RAB40C-207ENST00000563109 RRP36Q96EU6 259 aaKnown RBP21.83■■□□□ 1.09
RAB40C-207ENST00000563109 TEX13BQ9BXU2 312 aa21.83■■□□□ 1.09
RAB40C-207ENST00000563109 R3HDMLQ9H3Y0 253 aa21.83■■□□□ 1.09
RAB40C-207ENST00000563109 RIOX1Q9H6W3 641 aa21.83■■□□□ 1.09
RAB40C-207ENST00000563109 NCOA5Q9HCD5 579 aaKnown RBP21.83■■□□□ 1.09
RAB40C-207ENST00000563109 TXNRD2Q9NNW7 524 aa21.83■■□□□ 1.09
RAB40C-207ENST00000563109 SH2B1Q9NRF2 756 aaPredicted RBP21.83■■□□□ 1.09
RAB40C-207ENST00000563109 SEC63Q9UGP8 760 aaKnown RBP21.83■■□□□ 1.09
RAB40C-207ENST00000563109 GPR25O00155 361 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 CNMDO75829 334 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 CDKL5O76039 1030 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 HSPA1AP0DMV8 641 aaKnown RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 HSPA1BP0DMV9 641 aaKnown RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 COPB2P35606 906 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 ADD1P35611 737 aaKnown RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 SNAP25P60880 206 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 ME3Q16798 604 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 NOM1Q5C9Z4 860 aaKnown RBP21.82■■□□□ 1.08
RAB40C-207ENST00000563109 HOMER1Q86YM7 354 aa21.82■■□□□ 1.08
RAB40C-207ENST00000563109 CPXCR1Q8N123 301 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms