RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 NAA16Q6N069 864 aaPredicted RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 MIGA2Q7L4E1 593 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 ARMC9Q7Z3E5 817 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 OTUD7AQ8TE49 926 aaPredicted RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 SH3RF3Q8TEJ3 882 aaPredicted RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 CLMNQ96JQ2 1002 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 ZNF512BQ96KM6 892 aaPredicted RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 VRTNQ9H8Y1 702 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 DDX4Q9NQI0 724 aaKnown RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 AATFQ9NY61 560 aaKnown RBP eCLIP7.05□□□□□ -1.28
CDH13-206ENST00000562601 DYRK1BQ9Y463 629 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 PPP2R3BQ9Y5P8 575 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 OTOFQ9HC10 1997 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 DOCK2Q92608 1830 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 MAST2Q6P0Q8 1798 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 GAKO14976 1311 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 GPR75-ASB3A0A0A6YYF3 556 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 PPP1R12BO60237 982 aaPredicted RBP7.04□□□□□ -1.28
CDH13-206ENST00000562601 WDHD1O75717 1129 aaPredicted RBP7.04□□□□□ -1.28
CDH13-206ENST00000562601 IGHDP01880 384 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 CHGBP05060 677 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 LDHCP07864 332 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 RHOQP17081 205 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 CYP7A1P22680 504 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 FKBP1BP68106 108 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 CLDN10P78369 228 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 KIF23Q02241 960 aaPredicted RBP7.04□□□□□ -1.28
CDH13-206ENST00000562601 POU4F2Q12837 409 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 ANKRD45Q5TZF3 282 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 B4GALNT3Q6L9W6 998 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 RASAL3Q86YV0 1011 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 TEX11Q8IYF3 940 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 SIX5Q8N196 739 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 MAGEB6Q8N7X4 407 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 MIGA1Q8NAN2 632 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 TPCN2Q8NHX9 752 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 FAM151AQ8WW52 585 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 GMCL1Q96IK5 515 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 HHIPL1Q96JK4 782 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 ELP3Q9H9T3 547 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 ZNF358Q9NW07 568 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 SERTAD1Q9UHV2 236 aa7.04□□□□□ -1.28
CDH13-206ENST00000562601 MYH7P12883 1935 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 A0A1B0GTH6 734 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 DDTLA6NHG4 134 aaPredicted RBP7.03□□□□□ -1.28
CDH13-206ENST00000562601 A6NJY4 79 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 M0R2N6 131 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 CDK2AP1O14519 115 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 FOXN1O15353 648 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 STAU1O95793 577 aaKnown RBP7.03□□□□□ -1.28
CDH13-206ENST00000562601 VSIG8P0DPA2 414 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 ATP5JP18859 108 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 IREB2P48200 963 aaKnown RBP7.03□□□□□ -1.28
CDH13-206ENST00000562601 RHBDL3P58872 404 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 MTFR1Q15390 333 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 SLC4A8Q2Y0W8 1093 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 LDLRAD1Q5T700 205 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 FKBP1CQ5VVH2 108 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 FAM83AQ86UY5 434 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 ZSCAN29Q8IWY8 852 aaPredicted RBP7.03□□□□□ -1.28
CDH13-206ENST00000562601 TGFBRAP1Q8WUH2 860 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 ZKSCAN4Q969J2 545 aaPredicted RBP7.03□□□□□ -1.28
CDH13-206ENST00000562601 NOL10Q9BSC4 688 aaKnown RBP7.03□□□□□ -1.28
CDH13-206ENST00000562601 RWDD1Q9H446 243 aaPredicted RBP7.03□□□□□ -1.28
CDH13-206ENST00000562601 PAG1Q9NWQ8 432 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 FOCADQ5VW36 1801 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 MYH1P12882 1939 aa7.03□□□□□ -1.28
CDH13-206ENST00000562601 THSD7BQ9C0I4 1608 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 FAM196BA6NMK8 535 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 PDE6AP16499 860 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 MAP2K2P36507 400 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 MAP3K12Q12852 859 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 NOGQ13253 232 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 HDAC1Q13547 482 aaPredicted RBP7.02□□□□□ -1.29
CDH13-206ENST00000562601 TTF1Q15361 905 aaPredicted RBP7.02□□□□□ -1.29
CDH13-206ENST00000562601 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.02□□□□□ -1.29
CDH13-206ENST00000562601 MAPKAPK5Q8IW41 473 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDH13-206ENST00000562601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDH13-206ENST00000562601 AIDAQ96BJ3 306 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 WRNIP1Q96S55 665 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 CSRNP1Q96S65 589 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 HAUS7Q99871 368 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 IDI2Q9BXS1 227 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 NIFKQ9BYG3 293 aaKnown RBP7.02□□□□□ -1.29
CDH13-206ENST00000562601 ECHDC1Q9NTX5 307 aa7.02□□□□□ -1.29
CDH13-206ENST00000562601 SAP30BPQ9UHR5 308 aaKnown RBP7.02□□□□□ -1.29
CDH13-206ENST00000562601 ZNF532Q9HCE3 1301 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 CASP8AP2Q9UKL3 1982 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 RFX7Q2KHR2 1363 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L15C9J2P7 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L10C9JJH3 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L13C9JLJ4 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L12C9JPN9 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L11C9JVI0 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L21D6R901 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L18D6R9N7 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L22D6RA61 530 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms