RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 PGK2P07205 417 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 BMP3P12645 472 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 SNRNP48Q6IEG0 339 aaKnown RBP13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 RCSD1Q6JBY9 416 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 KCTD1Q719H9 257 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 STAG1Q8WVM7 1258 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 RAVER2Q9HCJ3 691 aaKnown RBP13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
LPCAT4-202ENST00000562404 SLC25A27O95847 323 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 CYBAP13498 195 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 SNAP25P60880 206 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 PRAMEF19Q5SWL8 479 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 ABRAQ8N0Z2 381 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 MAML3Q96JK9 1138 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 MMP19Q99542 508 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 DNAH12Q6ZR08 3092 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 ZNF536O15090 1300 aa13.12□□□□□ -0.31
LPCAT4-202ENST00000562404 H0YGN5 161 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 HIP1O00291 1037 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 ATP2A1O14983 1001 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 FCER1AP12319 257 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 CHMLP26374 656 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 SLC1A4P43007 532 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 ZNF792Q3KQV3 632 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 MFSD14CQ5VZR4 134 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 OLFML2BQ68BL8 750 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 MFSD6Q6ZSS7 791 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 ZKSCAN3Q9BRR0 538 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 DSCC1Q9BVC3 393 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 TEX13BQ9BXU2 312 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 PFASO15067 1338 aa13.11□□□□□ -0.31
LPCAT4-202ENST00000562404 ZNF213O14771 459 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 STAT2P52630 851 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 PTH1RQ03431 593 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 DPF3Q92784 378 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 FGD4Q96M96 766 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 TAF6LQ9Y6J9 622 aa13.1□□□□□ -0.31
LPCAT4-202ENST00000562404 DNAJC25-GNG10A0A024R161 153 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 B4E1Z4 1266 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 ZBED4O75132 1171 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 CNGA1P29973 690 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 SLC16A2P36021 539 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 DDX20Q9UHI6 824 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 ISY1Q9ULR0 285 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 MYH6P13533 1939 aa13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 FRMPD2Q68DX3 1309 aaPredicted RBP13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-202ENST00000562404 PLA2G6O60733 806 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 KDM4AO75164 1064 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 COL6A1P12109 1028 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 KCTD2Q14681 263 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 NECAB2Q7Z6G3 386 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 FAM160B2Q86V87 743 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 ZSWIM5Q9P217 1185 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 LRRC37A2A6NM11 1700 aa13.08□□□□□ -0.32
LPCAT4-202ENST00000562404 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 PDHBP11177 359 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 PCP11498 1178 aaKnown RBP13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 COPB2P35606 906 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 OAZ1P54368 228 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 CCDC174Q6PII3 467 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 DCAF4Q8WV16 495 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 ESR2Q92731 530 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 TINF2Q9BSI4 451 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 HTATIP2Q9BUP3 242 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 CPVLQ9H3G5 476 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 RNF41Q9H4P4 317 aaPredicted RBP13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 DDX49Q9Y6V7 483 aaKnown RBP13.07□□□□□ -0.32
LPCAT4-202ENST00000562404 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 SGSM2O43147 1006 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms