RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 MKNK2Q9HBH9 465 aa17.39■□□□□ 0.37
SPG7-205ENST00000561945 ZNF287Q9HBT7 754 aa17.39■□□□□ 0.37
SPG7-205ENST00000561945 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
SPG7-205ENST00000561945 M0R2C6 588 aa17.38■□□□□ 0.37
SPG7-205ENST00000561945 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
SPG7-205ENST00000561945 RNF180Q86T96 592 aa17.38■□□□□ 0.37
SPG7-205ENST00000561945 IFNL3Q8IZI9 196 aa17.38■□□□□ 0.37
SPG7-205ENST00000561945 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
SPG7-205ENST00000561945 NUP88Q99567 741 aaPredicted RBP17.38■□□□□ 0.37
SPG7-205ENST00000561945 TSEN34Q9BSV6 310 aaKnown RBP17.38■□□□□ 0.37
SPG7-205ENST00000561945 SLC38A10Q9HBR0 1119 aa17.38■□□□□ 0.37
SPG7-205ENST00000561945 MTMR4Q9NYA4 1195 aa17.38■□□□□ 0.37
SPG7-205ENST00000561945 RIPK3Q9Y572 518 aa17.38■□□□□ 0.37
SPG7-205ENST00000561945 SPTBN5Q9NRC6 3674 aaKnown RBP17.38■□□□□ 0.37
SPG7-205ENST00000561945 MINDY4BA8MYZ0 360 aa17.37■□□□□ 0.37
SPG7-205ENST00000561945 OAZ1P54368 228 aa17.37■□□□□ 0.37
SPG7-205ENST00000561945 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
SPG7-205ENST00000561945 SNRNP48Q6IEG0 339 aaKnown RBP17.37■□□□□ 0.37
SPG7-205ENST00000561945 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
SPG7-205ENST00000561945 TRIM43BA6NCK2 446 aa17.36■□□□□ 0.37
SPG7-205ENST00000561945 SNAI1O95863 264 aaPredicted RBP17.36■□□□□ 0.37
SPG7-205ENST00000561945 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
SPG7-205ENST00000561945 CCSAPQ6IQ19 270 aaPredicted RBP17.36■□□□□ 0.37
SPG7-205ENST00000561945 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
SPG7-205ENST00000561945 KLHDC9Q8NEP7 349 aa17.36■□□□□ 0.37
SPG7-205ENST00000561945 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
SPG7-205ENST00000561945 TRIM43Q96BQ3 446 aaPredicted RBP17.36■□□□□ 0.37
SPG7-205ENST00000561945 CEP95Q96GE4 821 aa17.36■□□□□ 0.37
SPG7-205ENST00000561945 GUCD1Q96NT3 240 aa17.36■□□□□ 0.37
SPG7-205ENST00000561945 FEM1BQ9UK73 627 aa17.36■□□□□ 0.37
SPG7-205ENST00000561945 A0A1W2PQ45 241 aaPredicted RBP17.35■□□□□ 0.37
SPG7-205ENST00000561945 A0A1W2PQY0 241 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 DLL1O00548 723 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 KIAA0355O15063 1070 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 TTLL1O95922 423 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 PGK1P00558 417 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 FDX1P10109 184 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 CST5P28325 142 aaPredicted RBP17.35■□□□□ 0.37
SPG7-205ENST00000561945 TDO2P48775 406 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 TLE2Q04725 743 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 SHHQ15465 462 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 ANKRD33Q7Z3H0 272 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 SH3RF1Q7Z6J0 888 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 ZNF444Q8N0Y2 327 aaPredicted RBP17.35■□□□□ 0.37
SPG7-205ENST00000561945 BADQ92934 168 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 FERMT2Q96AC1 680 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 FGD4Q96M96 766 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 TOX2Q96NM4 488 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 CNPY2Q9Y2B0 182 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 TACC3Q9Y6A5 838 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 SYNRGQ9UMZ2 1314 aa17.35■□□□□ 0.37
SPG7-205ENST00000561945 MOXD2PA6NHM9 499 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 ERC2O15083 957 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 ZBED4O75132 1171 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 ITGB8P26012 769 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 NKX3-2P78367 333 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 C9orf50Q5SZB4 431 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 CHST13Q8NET6 341 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 FBXO40Q9UH90 709 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 FAM184BQ9ULE4 1060 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 PCDHB15Q9Y5E8 787 aa17.34■□□□□ 0.37
SPG7-205ENST00000561945 MCM3APO60318 1980 aa17.33■□□□□ 0.37
SPG7-205ENST00000561945 FOXP2O15409 715 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 RAD21O60216 631 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 PLA2G6O60733 806 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 DUSP11O75319 330 aaKnown RBP17.33■□□□□ 0.36
SPG7-205ENST00000561945 PRDM1O75626 825 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 CLTBP09497 229 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 NOVP48745 357 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 ACLYP53396 1101 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 SMAD3P84022 425 aaKnown RBP17.33■□□□□ 0.36
SPG7-205ENST00000561945 DDX11Q96FC9 970 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 GMCL1Q96IK5 515 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 SEC62Q99442 399 aaKnown RBP17.33■□□□□ 0.36
SPG7-205ENST00000561945 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 KATNBL1Q9H079 304 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 PRDM5Q9NQX1 630 aaPredicted RBP17.33■□□□□ 0.36
SPG7-205ENST00000561945 LRRC37A2A6NM11 1700 aa17.33■□□□□ 0.36
SPG7-205ENST00000561945 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
SPG7-205ENST00000561945 BMP3P12645 472 aa17.32■□□□□ 0.36
SPG7-205ENST00000561945 PDE4BQ07343 736 aa17.32■□□□□ 0.36
SPG7-205ENST00000561945 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
SPG7-205ENST00000561945 KIFC2Q96AC6 838 aa17.32■□□□□ 0.36
SPG7-205ENST00000561945 UPF3AQ9H1J1 476 aaKnown RBP17.32■□□□□ 0.36
SPG7-205ENST00000561945 ABHD16BQ9H3Z7 469 aa17.32■□□□□ 0.36
SPG7-205ENST00000561945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
SPG7-205ENST00000561945 ZNF536O15090 1300 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 ELP1O95163 1332 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 ADCY6O43306 1168 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 APPP05067 770 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 PPARAQ07869 468 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 FAAP100Q0VG06 881 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 ACVR2BQ13705 512 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 SLFN13Q68D06 897 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 CPXCR1Q8N123 301 aa17.31■□□□□ 0.36
SPG7-205ENST00000561945 LRRC47Q8N1G4 583 aaKnown RBP17.31■□□□□ 0.36
SPG7-205ENST00000561945 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
SPG7-205ENST00000561945 NUP133Q8WUM0 1156 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms