RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 DNM1Q05193 864 aaKnown RBP11.85□□□□□ -0.51
USP3-219ENST00000561326 PRKG1Q13976 671 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 TTLL12Q14166 644 aaPredicted RBP11.85□□□□□ -0.51
USP3-219ENST00000561326 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 ARMC9Q7Z3E5 817 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 DIS3L2Q8IYB7 885 aaKnown RBP11.85□□□□□ -0.51
USP3-219ENST00000561326 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 ZNF280CQ8ND82 737 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 BICD2Q8TD16 824 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 ANP32EQ9BTT0 268 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 C6orf50Q9HD87 102 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
USP3-219ENST00000561326 FEM1BQ9UK73 627 aa11.85□□□□□ -0.51
USP3-219ENST00000561326 BTBD18B2RXH4 712 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 UBE2Q2LH0YL09 131 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 WDR46O15213 610 aaKnown RBP11.84□□□□□ -0.51
USP3-219ENST00000561326 SPP2Q13103 211 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 ZYXQ15942 572 aaKnown RBP11.84□□□□□ -0.51
USP3-219ENST00000561326 SYDE2Q5VT97 1194 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 ANKRD13AQ8IZ07 590 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP3-219ENST00000561326 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
USP3-219ENST00000561326 MTMR8Q96EF0 704 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 GLT8D2Q9H1C3 349 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 CPVLQ9H3G5 476 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 ZHX2Q9Y6X8 837 aa11.84□□□□□ -0.51
USP3-219ENST00000561326 GOLGA6L4A6NEF3 574 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 UNCXA6NJT0 531 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 STXBP3O00186 592 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 BACE1P56817 501 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 SLC35G1Q2M3R5 365 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 RILPL1Q5EBL4 403 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 FAM83BQ5T0W9 1011 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 WWC2Q6AWC2 1192 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 FAM173BQ6P4H8 233 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 RASGRP2Q7LDG7 609 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 LDHDQ86WU2 507 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 PRPF38AQ8NAV1 312 aaKnown RBP11.83□□□□□ -0.52
USP3-219ENST00000561326 TMEM87AQ8NBN3 555 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 GPKOWQ92917 476 aaPredicted RBP eCLIP11.83□□□□□ -0.52
USP3-219ENST00000561326 NUP88Q99567 741 aaPredicted RBP11.83□□□□□ -0.52
USP3-219ENST00000561326 GLIS2Q9BZE0 524 aaPredicted RBP11.83□□□□□ -0.52
USP3-219ENST00000561326 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 NOL7Q9UMY1 257 aaKnown RBP11.83□□□□□ -0.52
USP3-219ENST00000561326 PCDHA4Q9UN74 947 aa11.83□□□□□ -0.52
USP3-219ENST00000561326 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 ESYT2A0FGR8 921 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 SMCO2A6NFE2 343 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 FIBPO43427 364 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 FDX1P10109 184 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
USP3-219ENST00000561326 MTMR2Q13614 643 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 MAP3K11Q16584 847 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 MCTP2Q6DN12 878 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 PPP1R18Q6NYC8 613 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 FBXO11Q86XK2 927 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 DAGLBQ8NCG7 672 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 AMNQ9BXJ7 453 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 ZMYND12Q9H0C1 365 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 LMBRD1Q9NUN5 540 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 RCOR1Q9UKL0 485 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 PNMA2Q9UL42 364 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 PRR12Q9ULL5 1215 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 TRPM7Q96QT4 1865 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 ELP1O95163 1332 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 PTPRFP10586 1907 aa11.82□□□□□ -0.52
USP3-219ENST00000561326 SSC5DA1L4H1 1573 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 TRIM75PA6NK02 468 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 KIF28PB7ZC32 967 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 TRAK2O60296 914 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 YEATS4O95619 227 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 MBD3O95983 291 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 CEBPZQ03701 1054 aaKnown RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 VGLL4Q14135 290 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 SF3A1Q15459 793 aaKnown RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 CDC37Q16543 378 aaPredicted RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 QRICH1Q2TAL8 776 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 MAP1SQ66K74 1059 aaPredicted RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 ERO1BQ86YB8 467 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 TEX2Q8IWB9 1127 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 COA7Q96BR5 231 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 EMILIN3Q9NT22 766 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 FZD1Q9UP38 647 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 CEP131Q9UPN4 1083 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 AFG3L2Q9Y4W6 797 aa11.81□□□□□ -0.52
USP3-219ENST00000561326 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
USP3-219ENST00000561326 PCDHA1Q9Y5I3 950 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms