RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 HABP4Q5JVS0 413 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 OLFML2BQ68BL8 750 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 SNRNP48Q6IEG0 339 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 RASGRP2Q7LDG7 609 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 TICAM2Q86XR7 235 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 KIFC2Q96AC6 838 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 TEX13BQ9BXU2 312 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 NBPF3Q9H094 633 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 C11orf49Q9H6J7 331 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 IL17RBQ9NRM6 502 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 TOMM22Q9NS69 142 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 STX8Q9UNK0 236 aa20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 COLQQ9Y215 455 aaPredicted RBP20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 RANBP2P49792 3224 aaKnown RBP20.39■□□□□ 0.85
CDC42BPB-208ENST00000561271 PFASO15067 1338 aa20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 ORC4O43929 436 aa20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 PGK2P07205 417 aa20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 HAND2P61296 217 aa20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 RRP12Q5JTH9 1297 aaKnown RBP20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 PRPF38AQ8NAV1 312 aaKnown RBP20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 MAML3Q96JK9 1138 aa20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 SLC5A4Q9NY91 659 aa20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 DDX20Q9UHI6 824 aaKnown RBP20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 NR2E3Q9Y5X4 410 aa20.38■□□□□ 0.85
CDC42BPB-208ENST00000561271 BMP3P12645 472 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 COPB2P35606 906 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 SLC4A3P48751 1232 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 KCTD2Q14681 263 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 CHRDL2Q6WN34 429 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 CPXCR1Q8N123 301 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 DIAPH3Q9NSV4 1193 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 FEM1BQ9UK73 627 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 RIPK3Q9Y572 518 aa20.37■□□□□ 0.85
CDC42BPB-208ENST00000561271 PDE4AP27815 886 aa20.36■□□□□ 0.85
CDC42BPB-208ENST00000561271 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
CDC42BPB-208ENST00000561271 C7orf61Q8IZ16 206 aa20.36■□□□□ 0.85
CDC42BPB-208ENST00000561271 SLC38A10Q9HBR0 1119 aa20.36■□□□□ 0.85
CDC42BPB-208ENST00000561271 RAVER2Q9HCJ3 691 aaKnown RBP20.36■□□□□ 0.85
CDC42BPB-208ENST00000561271 MTMR7Q9Y216 660 aa20.36■□□□□ 0.85
CDC42BPB-208ENST00000561271 CTDP1Q9Y5B0 961 aaPredicted RBP20.36■□□□□ 0.85
CDC42BPB-208ENST00000561271 TMEM232C9JQI7 657 aa20.35■□□□□ 0.85
CDC42BPB-208ENST00000561271 ZBED4O75132 1171 aa20.35■□□□□ 0.85
CDC42BPB-208ENST00000561271 FGRP09769 529 aa20.35■□□□□ 0.85
CDC42BPB-208ENST00000561271 ANO1Q5XXA6 986 aa20.35■□□□□ 0.85
CDC42BPB-208ENST00000561271 TBC1D10CQ8IV04 446 aa20.35■□□□□ 0.85
CDC42BPB-208ENST00000561271 GMCL1Q96IK5 515 aa20.35■□□□□ 0.85
CDC42BPB-208ENST00000561271 MSCO60682 206 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 COL6A1P12109 1028 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 MCCP23508 829 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 SLC1A4P43007 532 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 STAT2P52630 851 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 IKQ13123 557 aaPredicted RBP20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 PPP4R3BQ5MIZ7 849 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 PRAMEF19Q5SWL8 479 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 KCTD1Q719H9 257 aa20.34■□□□□ 0.85
CDC42BPB-208ENST00000561271 NEDD4P46934 1319 aa20.33■□□□□ 0.85
CDC42BPB-208ENST00000561271 ATP2A1O14983 1001 aa20.33■□□□□ 0.85
CDC42BPB-208ENST00000561271 ZNF792Q3KQV3 632 aa20.33■□□□□ 0.85
CDC42BPB-208ENST00000561271 SEPT4O43236 478 aa20.32■□□□□ 0.84
CDC42BPB-208ENST00000561271 CCDC96Q2M329 555 aa20.32■□□□□ 0.84
CDC42BPB-208ENST00000561271 AKNAD1Q5T1N1 836 aa20.32■□□□□ 0.84
CDC42BPB-208ENST00000561271 HOMER2Q9NSB8 354 aa20.32■□□□□ 0.84
CDC42BPB-208ENST00000561271 ZMYND8Q9ULU4 1186 aaPredicted RBP20.32■□□□□ 0.84
CDC42BPB-208ENST00000561271 HIP1O00291 1037 aa20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 GSPT1P15170 499 aaKnown RBP20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 NOVP48745 357 aa20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 TTC22Q5TAA0 569 aa20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 MFSD6Q6ZSS7 791 aa20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 FAM160B2Q86V87 743 aa20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 STAG1Q8WVM7 1258 aa20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 TINF2Q9BSI4 451 aa20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 RBM27Q9P2N5 1060 aaKnown RBP20.31■□□□□ 0.84
CDC42BPB-208ENST00000561271 OAZ1P54368 228 aa20.3■□□□□ 0.84
CDC42BPB-208ENST00000561271 LRRC26Q2I0M4 334 aa20.3■□□□□ 0.84
CDC42BPB-208ENST00000561271 CHURC1Q8WUH1 139 aa20.3■□□□□ 0.84
CDC42BPB-208ENST00000561271 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
CDC42BPB-208ENST00000561271 IL25Q9H293 177 aa20.3■□□□□ 0.84
CDC42BPB-208ENST00000561271 PCDH10Q9P2E7 1040 aa20.3■□□□□ 0.84
CDC42BPB-208ENST00000561271 DIS3Q9Y2L1 958 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-208ENST00000561271 ZNF536O15090 1300 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 DNAJC25-GNG10A0A024R161 153 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 DNM1LO00429 736 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 TOP1P11387 765 aaKnown RBP20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 TAL1P17542 331 aaPredicted RBP20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 SNAP25P60880 206 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 GJC2Q5T442 439 aaPredicted RBP20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 RCSD1Q6JBY9 416 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 CCDC174Q6PII3 467 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 DCAF4Q8WV16 495 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 TMEM47Q9BQJ4 181 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 PRR12Q9ULL5 1215 aa20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 BAZ2BQ9UIF8 2168 aaKnown RBP20.29■□□□□ 0.84
CDC42BPB-208ENST00000561271 MYCNP04198 464 aaPredicted RBP20.28■□□□□ 0.84
CDC42BPB-208ENST00000561271 FDX1P10109 184 aa20.28■□□□□ 0.84
CDC42BPB-208ENST00000561271 PCP11498 1178 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-208ENST00000561271 SYN1P17600 705 aa20.28■□□□□ 0.84
CDC42BPB-208ENST00000561271 FXR1P51114 621 aaKnown RBP eCLIP20.28■□□□□ 0.84
CDC42BPB-208ENST00000561271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.28■□□□□ 0.84
CDC42BPB-208ENST00000561271 ANKRD35Q8N283 1001 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms