RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 VWA5AO00534 786 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 STRNO43815 780 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 PLA2G6O60733 806 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 OAZ1P54368 228 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 UBXN2AP68543 259 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 LACTBP83111 547 aaPredicted RBP12.45□□□□□ -0.42
TPM1-229ENST00000561242 TKFCQ3LXA3 575 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 SNRNP48Q6IEG0 339 aaKnown RBP12.45□□□□□ -0.42
TPM1-229ENST00000561242 PLEKHH3Q7Z736 793 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 SIAH1Q8IUQ4 282 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 MB21D2Q8IYB1 491 aaPredicted RBP12.45□□□□□ -0.42
TPM1-229ENST00000561242 ZNF654Q8IZM8 581 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 SOCS4Q8WXH5 440 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 ATG4CQ96DT6 458 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 LRRC2Q9BYS8 371 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 SPATC1LQ9H0A9 340 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 CCPG1Q9ULG6 757 aa12.45□□□□□ -0.42
TPM1-229ENST00000561242 NAV1Q8NEY1 1877 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
TPM1-229ENST00000561242 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 SH2B2O14492 632 aaPredicted RBP12.44□□□□□ -0.42
TPM1-229ENST00000561242 CDKL5O76039 1030 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 GOLGA8HP0CJ92 632 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 PDHBP11177 359 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 ALAS1P13196 640 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
TPM1-229ENST00000561242 ZNF543Q08ER8 600 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 RTN1Q16799 776 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 MCF2L2Q86YR7 1114 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 CUL5Q93034 780 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 MMP19Q99542 508 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 MAP3K14Q99558 947 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 MORF4L1Q9UBU8 362 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 MYH1P12882 1939 aa12.44□□□□□ -0.42
TPM1-229ENST00000561242 SLC16A2P36021 539 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 RGS2P41220 211 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 NEK4P51957 841 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 MOGSQ13724 837 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 STOX1Q6ZVD7 989 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 TRIM22Q8IYM9 498 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 SHCBP1Q8NEM2 672 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 CHST13Q8NET6 341 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 IGDCC4Q8TDY8 1250 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 BRF1Q92994 677 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 UBA5Q9GZZ9 404 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 SLKQ9H2G2 1235 aaPredicted RBP12.43□□□□□ -0.42
TPM1-229ENST00000561242 RAVER2Q9HCJ3 691 aaKnown RBP12.43□□□□□ -0.42
TPM1-229ENST00000561242 FBXO28Q9NVF7 368 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
TPM1-229ENST00000561242 PRR12Q9ULL5 1215 aa12.43□□□□□ -0.42
TPM1-229ENST00000561242 MRPL11Q9Y3B7 192 aaKnown RBP12.43□□□□□ -0.42
TPM1-229ENST00000561242 BCRP11274 1271 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 XBP1P17861 261 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 ERCC3P19447 782 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 ADCK5Q3MIX3 580 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 SLC9C1Q4G0N8 1177 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 MFSD14CQ5VZR4 134 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 FBXO11Q86XK2 927 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 CCDC144CPQ8IYA2 1237 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 TNS4Q8IZW8 715 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 FANCBQ8NB91 859 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 TRERF1Q96PN7 1200 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 LY9Q9HBG7 655 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 HOMER2Q9NSB8 354 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 RBPJLQ9UBG7 517 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 MYH7P12883 1935 aa12.42□□□□□ -0.42
TPM1-229ENST00000561242 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
TPM1-229ENST00000561242 SLC15A5A6NIM6 579 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 GRM4Q14833 912 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 SEC23AQ15436 765 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 FBXO46Q6PJ61 603 aaPredicted RBP12.41□□□□□ -0.42
TPM1-229ENST00000561242 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 RIOX2Q8IUF8 465 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 ADGRF4Q8IZF3 695 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 CCDC82Q8N4S0 544 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 CCDC12Q8WUD4 166 aaPredicted RBP12.41□□□□□ -0.42
TPM1-229ENST00000561242 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 KCNB2Q92953 911 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 MOV10L1Q9BXT6 1211 aaKnown RBP12.41□□□□□ -0.42
TPM1-229ENST00000561242 UPF3BQ9BZI7 483 aaKnown RBP12.41□□□□□ -0.42
TPM1-229ENST00000561242 ACAD9Q9H845 621 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 SLC38A10Q9HBR0 1119 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 SRRDQ9UH36 339 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 TACC3Q9Y6A5 838 aa12.41□□□□□ -0.42
TPM1-229ENST00000561242 PTPDC1A2A3K4 754 aa12.4□□□□□ -0.42
TPM1-229ENST00000561242 ICAM1P05362 532 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms