RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	CRKL	P46109	303 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	LIG3	P49916	1009 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	ZNF252P-AS1	Q0IIN9	211 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	MBTPS1	Q14703	1052 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	MTHFSD	Q2M296	383 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	AKAP4	Q5JQC9	854 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	MAP1S	Q66K74	1059 aa	Predicted RBP	9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	RUSC1	Q9BVN2	902 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	CCDC86	Q9H6F5	360 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	COPRS	Q9NQ92	184 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	SRP68	Q9UHB9	627 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	TLR6	Q9Y2C9	796 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	SAMM50	Q9Y512	469 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071	PLEKHG2	Q9H7P9	1386 aa		9.45	□□□□□ -0.9
MARK3-223	ENST00000561071		A0A0G2JLW4	131 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	SCAMP3	O14828	347 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	U2SURP	O15042	1029 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	RNMT	O43148	476 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	GYS1	P13807	737 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	NRG1	Q02297	640 aa	Predicted RBP	9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	ADGRE1	Q14246	886 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	PDE3A	Q14432	1141 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	C9orf131	Q5VYM1	1079 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	INTS5	Q6P9B9	1019 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	DNAJC10	Q8IXB1	793 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	TMEM130	Q8N3G9	435 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	WDR89	Q96FK6	387 aa	Predicted RBP	9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	EMILIN2	Q9BXX0	1053 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	AKTIP	Q9H8T0	292 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	SLC52A2	Q9HAB3	445 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	GGT7	Q9UJ14	662 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	CNTNAP4	Q9C0A0	1308 aa		9.44	□□□□□ -0.9
MARK3-223	ENST00000561071	ITGB2	P05107	769 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	LIG1	P18858	919 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	NOS3	P29474	1203 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	IREB2	P48200	963 aa	Known RBP	9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	C1QTNF8	P60827	252 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	LLGL2	Q6P1M3	1020 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	HS2ST1	Q7LGA3	356 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	ERMP1	Q7Z2K6	904 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	NLGN1	Q8N2Q7	840 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	WFDC12	Q8WWY7	111 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	KBTBD4	Q9NVX7	518 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	PCDHB5	Q9Y5E4	795 aa		9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	MYH14	Q7Z406	1995 aa	Known RBP	9.43	□□□□□ -0.9
MARK3-223	ENST00000561071	ZNF862	O60290	1169 aa		9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	HDLBP	Q00341	1268 aa	Known RBP	9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	EXOSC6	Q5RKV6	272 aa	Known RBP	9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	TMEM151A	Q8N4L1	468 aa		9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	PHC3	Q8NDX5	983 aa		9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	ZNF526	Q8TF50	670 aa	Predicted RBP	9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	RNF34	Q969K3	372 aa		9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	RSRP1	Q9BUV0	290 aa		9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	TMPRSS13	Q9BYE2	586 aa		9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	RNF208	Q9H0X6	261 aa		9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	METTL5	Q9NRN9	209 aa	Known RBP	9.42	□□□□□ -0.9
MARK3-223	ENST00000561071	MINDY4B	A8MYZ0	360 aa		9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	DPEP1	P16444	411 aa		9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	TFE3	P19532	575 aa	Predicted RBP	9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	DDR1	Q08345	913 aa		9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	PLA2G4E	Q3MJ16	856 aa		9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	AGMO	Q6ZNB7	445 aa		9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	NPM2	Q86SE8	214 aa	Known RBP	9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	METTL16	Q86W50	562 aa	Known RBP	9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	GPBAR1	Q8TDU6	330 aa		9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	CYP8B1	Q9UNU6	501 aa		9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	COL5A3	P25940	1745 aa	Predicted RBP	9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	CIC	Q96RK0	1608 aa	Predicted RBP	9.41	□□□□□ -0.9
MARK3-223	ENST00000561071	COL3A1	P02461	1466 aa	Predicted RBP	9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	ATP10D	Q9P241	1426 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	SCN11A	Q9UI33	1791 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	USP42	Q9H9J4	1324 aa	Known RBP	9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	MEGF11	A6BM72	1044 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	CYP19A1	P11511	503 aa	Predicted RBP	9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	RLBP1	P12271	317 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	GBP2	P32456	591 aa	Predicted RBP	9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	RPS26	P62854	115 aa	Known RBP	9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	PTPN11	Q06124	597 aa	Predicted RBP	9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	LRRC14	Q15048	493 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	ZNF394	Q53GI3	561 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	RELL1	Q8IUW5	271 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	IL17RE	Q8NFR9	667 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	PHACTR3	Q96KR7	559 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	WDR18	Q9BV38	432 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	PCDHGB7	Q9Y5F8	929 aa		9.4	□□□□□ -0.9
MARK3-223	ENST00000561071	PXDNL	A1KZ92	1463 aa		9.4	□□□□□ -0.91
MARK3-223	ENST00000561071	TJP1	Q07157	1748 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	NPC1L1	Q9UHC9	1359 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	ZNF831	Q5JPB2	1677 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	AOC2	O75106	756 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	GLB1	P16278	677 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	TGFB2	P61812	414 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	SEPT6	Q14141	434 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	TXNRD3	Q86VQ6	643 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	GAL3ST3	Q96A11	431 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	MEGF10	Q96KG7	1140 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	RHOV	Q96L33	236 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	TMEM74	Q96NL1	305 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	RAD18	Q9NS91	495 aa		9.39	□□□□□ -0.91
MARK3-223	ENST00000561071	KRT82	Q9NSB4	513 aa		9.39	□□□□□ -0.91

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