RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 VPS54Q9P1Q0 977 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 ATP6V1DQ9Y5K8 247 aa14.07□□□□□ -0.16
HERC1-205ENST00000559886 PARP14Q460N5 1801 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 UNCXA6NJT0 531 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 TRIM75PA6NK02 468 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 MMP1P03956 469 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 STAT2P52630 851 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 RESTQ13127 1097 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 ERO1BQ86YB8 467 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 C12orf42Q96LP6 360 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 ZNF408Q9H9D4 720 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 PNMA6FA0A0J9YX94 578 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 ITGBL1O95965 494 aaPredicted RBP14.06□□□□□ -0.16
HERC1-205ENST00000559886 FKBP1BP68106 108 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 PPATQ06203 517 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 SYDE2Q5VT97 1194 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 WWC2Q6AWC2 1192 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 MCTP1Q6DN14 999 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 FAM177A1Q8N128 213 aaPredicted RBP14.06□□□□□ -0.16
HERC1-205ENST00000559886 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
HERC1-205ENST00000559886 CHURC1Q8WUH1 139 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 PHF20Q9BVI0 1012 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 ELP3Q9H9T3 547 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 BARHL2Q9NY43 387 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 KCNJ14Q9UNX9 436 aa14.06□□□□□ -0.16
HERC1-205ENST00000559886 ZBTB5O15062 677 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
HERC1-205ENST00000559886 KIF23Q02241 960 aaPredicted RBP14.05□□□□□ -0.16
HERC1-205ENST00000559886 IKQ13123 557 aaPredicted RBP14.05□□□□□ -0.16
HERC1-205ENST00000559886 DGKZQ13574 1117 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 HEATR3Q7Z4Q2 680 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 GPKOWQ92917 476 aaPredicted RBP eCLIP14.05□□□□□ -0.162e-6■■■■□ 26.1
HERC1-205ENST00000559886 FEM1BQ9UK73 627 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 SPDYE5A6NIY4 337 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 hCG_1984214I3L0E3 225 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 STXBP3O00186 592 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 VCAM1P19320 739 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 HMGCS2P54868 508 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 SH3D19Q5HYK7 790 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 FAM160B2Q86V87 743 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 ZNF713Q8N859 430 aaPredicted RBP14.05□□□□□ -0.16
HERC1-205ENST00000559886 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 GBP4Q96PP9 640 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
HERC1-205ENST00000559886 PRR12Q9ULL5 1215 aa14.05□□□□□ -0.16
HERC1-205ENST00000559886 U2AF2P26368 475 aaKnown RBP eCLIP14.04□□□□□ -0.167e-7■■■■□ 22.5
HERC1-205ENST00000559886 SAFBQ15424 915 aaKnown RBP eCLIP14.04□□□□□ -0.16
HERC1-205ENST00000559886 TYW1BQ6NUM6 668 aa14.04□□□□□ -0.16
HERC1-205ENST00000559886 GBA2Q9HCG7 927 aaPredicted RBP14.04□□□□□ -0.16
HERC1-205ENST00000559886 RLFQ13129 1914 aa14.04□□□□□ -0.16
HERC1-205ENST00000559886 LOC285556D6RIA3 1793 aa14.04□□□□□ -0.16
HERC1-205ENST00000559886 CELF2O95319 508 aaKnown RBP14.04□□□□□ -0.16
HERC1-205ENST00000559886 NPY5RQ15761 445 aa14.04□□□□□ -0.16
HERC1-205ENST00000559886 CDC37Q16543 378 aaPredicted RBP14.04□□□□□ -0.16
HERC1-205ENST00000559886 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
HERC1-205ENST00000559886 KIF28PB7ZC32 967 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 PPP1R11O60927 126 aaPredicted RBP14.03□□□□□ -0.16
HERC1-205ENST00000559886 PPIL2Q13356 520 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 QRICH1Q2TAL8 776 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 BRAPQ7Z569 592 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 C2orf69Q8N8R5 385 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 CCDC148Q8NFR7 591 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 FOXP1Q9H334 677 aaPredicted RBP14.03□□□□□ -0.16
HERC1-205ENST00000559886 RPAP3Q9H6T3 665 aaPredicted RBP14.03□□□□□ -0.16
HERC1-205ENST00000559886 FBXO28Q9NVF7 368 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.03□□□□□ -0.16
HERC1-205ENST00000559886 SMCHD1A6NHR9 2005 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 BTBD18B2RXH4 712 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 CXCL11O14625 94 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 IRF6O14896 467 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 CALML3P27482 149 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 NLRP5P59047 1200 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 FOXD4L6Q3SYB3 417 aaPredicted RBP14.03□□□□□ -0.16
HERC1-205ENST00000559886 FAM173BQ6P4H8 233 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 FOXD4L3Q6VB84 417 aaPredicted RBP14.03□□□□□ -0.16
HERC1-205ENST00000559886 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
HERC1-205ENST00000559886 TMOD4Q9NZQ9 345 aa14.03□□□□□ -0.16
HERC1-205ENST00000559886 NAPAP54920 295 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 CST9Q5W186 159 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 GALNT17Q6IS24 598 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 PRPF38AQ8NAV1 312 aaKnown RBP14.02□□□□□ -0.16
HERC1-205ENST00000559886 KIFC2Q96AC6 838 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 OPTNQ96CV9 577 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 SLC10A4Q96EP9 437 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 TANGO6Q9C0B7 1094 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 ZMYND12Q9H0C1 365 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 KCNH4Q9UQ05 1017 aa14.02□□□□□ -0.16
HERC1-205ENST00000559886 ESYT2A0FGR8 921 aa14.02□□□□□ -0.17
HERC1-205ENST00000559886 KRT2P35908 639 aa14.02□□□□□ -0.17
HERC1-205ENST00000559886 DNM1Q05193 864 aaKnown RBP14.02□□□□□ -0.17
HERC1-205ENST00000559886 GNL2Q13823 731 aaKnown RBP14.02□□□□□ -0.17
HERC1-205ENST00000559886 NFKBIBQ15653 356 aa14.02□□□□□ -0.17
HERC1-205ENST00000559886 OXER1Q8TDS5 423 aa14.02□□□□□ -0.17
HERC1-205ENST00000559886 COA7Q96BR5 231 aa14.02□□□□□ -0.17
HERC1-205ENST00000559886 SLF1Q9BQI6 1058 aa14.02□□□□□ -0.17
HERC1-205ENST00000559886 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.17
HERC1-205ENST00000559886 BRMS1Q9HCU9 246 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms